Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5004 ATGAGAAAAAACGTGATAGATTTTTTGATAGACACACACTACGGTCTTGAACTTGCGCCAGAAACCCTTTATCTTTGTGTCAACATTCTTGATCGATTTCTTTTGAAATTCAATTTTGAGGGAATAAGAATAACAAAGGAGGAATTTGAATTTCTTGGCCTTGTCTCATTGTTGTTAGCTTCCAAGTATGAAGAAAAAGATAAACTTAGTGTTTATGCGTTGGAATACATAACACAATATTCTTATACTTCTGATGAAATATTTGAAACGGAGAATGTTATCCTGCAAAAGCTTGATTGGGTTTTAACGGTTCCAACGCCTTATGTGTTTCTTGTTCGAAACATAAAGGCGTGTCTTTTATCCGATGATGACAAGATCATGGAGAATATGGTGCTTTTCTTTTCCGAGCTTAGCTTGACGCATTATCCAATTGTGTGCAGCTATAAGCCTTCTATTATTGCTGCTTCTGCTGTGTATTGTGCAAGAATCGTTCTTAGAAGGAACCCCTTTTGGAGCAAGGCTTTGAAGATGTGTACAAGTTACTCTGAGAAGAAGTTAAGGTCTTGTGCTAAGGTTATGATGAAACTGTGCAAAGAAACTTGTAGAGATGGAAGCATGGATGTGTTTAGGAAATATTCAAGTGCAGATTATTTTAAGGTTGCATGTGTTGCTCAACAGAAATTCTCCAACAATCGTTTTGATCCTAGAGTTTGTCTCAATTATTAA 726 0.3609 MRKNVIDFLIDTHYGLELAPETLYLCVNILDRFLLKFNFEGIRITKEEFEFLGLVSLLLASKYEEKDKLSVYALEYITQYSYTSDEIFETENVILQKLDWVLTVPTPYVFLVRNIKACLLSDDDKIMENMVLFFSELSLTHYPIVCSYKPSIIAASAVYCARIVLRRNPFWSKALKMCTSYSEKKLRSCAKVMMKLCKETCRDGSMDVFRKYSSADYFKVACVAQQKFSNNRFDPRVCLNY* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5004 241 Gene3D - 1 96 - -
Mal2g5004 241 PANTHER CYCLINS 1 228 IPR039361 -
Mal2g5004 241 PANTHER CYCLIN-B1-4 1 228 - -
Mal2g5004 241 CDD CYCLIN 103 194 IPR013763 -
Mal2g5004 241 SMART cyclin_7 109 195 IPR013763 -
Mal2g5004 241 SMART cyclin_7 7 96 IPR013763 -
Mal2g5004 241 CDD CYCLIN 1 95 IPR013763 -
Mal2g5004 241 SMART Cyclin_C_2 105 226 IPR004367 -
Mal2g5004 241 Gene3D - 97 232 - -
Mal2g5004 241 SUPERFAMILY Cyclin-like 1 100 IPR036915 -
Mal2g5004 241 ProSitePatterns Cyclins signature. 2 33 IPR006671 -
Mal2g5004 241 Pfam Cyclin, C-terminal domain 105 223 IPR004367 -
Mal2g5004 241 SUPERFAMILY Cyclin-like 104 225 IPR036915 -
Mal2g5004 241 PIRSF Cyclin_A_B_D_E 1 235 IPR039361 -
Mal2g5004 241 Pfam Cyclin, N-terminal domain 1 102 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5004 Mal-Chr2 115884635 115885360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5004 1 221 Core Cell Cycle Gene Families AT2G26760 41.629 7.54e-53 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5004 K21777 - jre:109013760 195.282