Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4989 ATGCAGCAGATTTCAAGAGTTATGCAGCATTTCTTGTTCGAAACGCATTTTGTTATTCCAGAATGTGATGATCCAGAAAATGATCCATTGAAGAAAAAATGGATGGTGATGTTGGGGGCGCGGTGGAGAGAATTTAAAGCACGACTCACAAAGGATTATATTACAAGTCCCAAACCCGAACGCCCCCCTCCGCATATCATGTATCCTTTTCTTAAAGAAGAGACATGGAAGCAGTTCTTGGAGTCTAGAAATACTTCTGATTTTAAGGTTGATAATCTTAGTGAGAATCTCGCACAGCTTGAAACAAACCTGGAAGCAAAACTTAGAGCAAAATTTACCGCAGAGTTTGAACAAAAGATGTCCGTAGAGCGTGAGTTGATGCAACAAACATTTATGGAGACACTTAAGAGTATGGGTTTCACCCAAACCTCACAAACAAACAAGGAAATTGATCTTTGTCCTGAAAAAGTTGTAATTGGAAGCACAAAAGGTTCTTGTACCGCTGCACCAGATAATCACACGAAGGACTCGACCACGGACAATGTTCAAAAATTGCTATCTCTAGTTTTGGAACTTGAAGATGATATACTTGTACCATTAGAACATGATCCTGCTATGGGAGTTTATCAATTAGCTCAGGGTATCAGAAAGAAGCCTCAGAAGCCTAAATGGGATTATCCCAAACCAAGGGTGCAACCTAATGGGAATGACTGTGGCTATTATGTGATGAAGAATATGCTAGACATTGTCTCTGCTAATATTACTAAGTCTTGGATAGAGGCACAACCAAAACTTTGTCGAAGATACAGCACAAAATGGAGAGGGATATGTTCAGACACGGGAATCTGTAAAGATGCGTGCAACACCTTAGAACAAGCTGCTTTTGGAGCATGTCACCTTGATGGAATTGGATTTGCTTGCTTCTGTTACTTCAACTGCTAA 942 0.4023 MQQISRVMQHFLFETHFVIPECDDPENDPLKKKWMVMLGARWREFKARLTKDYITSPKPERPPPHIMYPFLKEETWKQFLESRNTSDFKVDNLSENLAQLETNLEAKLRAKFTAEFEQKMSVERELMQQTFMETLKSMGFTQTSQTNKEIDLCPEKVVIGSTKGSCTAAPDNHTKDSTTDNVQKLLSLVLELEDDILVPLEHDPAMGVYQLAQGIRKKPQKPKWDYPKPRVQPNGNDCGYYVMKNMLDIVSANITKSWIEAQPKLCRRYSTKWRGICSDTGICKDACNTLEQAAFGACHLDGIGFACFCYFNC* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4989 313 SUPERFAMILY Cysteine proteinases 219 268 IPR038765 -
Mal2g4989 313 Pfam Gamma-thionin family 264 313 - -
Mal2g4989 313 SUPERFAMILY Scorpion toxin-like 264 313 IPR036574 -
Mal2g4989 313 Gene3D - 265 313 IPR036574 -
Mal2g4989 313 Coils Coil 90 110 - -
Mal2g4989 313 PANTHER DEFENSIN-LIKE PROTEIN 18-RELATED 255 313 - -
Mal2g4989 313 PANTHER DEFENSIN-LIKE PROTEIN 1 255 313 - -
Mal2g4989 313 SMART gth_4 265 313 IPR003614 GO:0006952
Mal2g4989 313 ProSitePatterns Gamma-thionins family signature. 264 287 IPR008176 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4989 Mal-Chr2 115520696 115523707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4989 264 313 Plant Defensins Gene Families AT1G19610 50.000 6.55e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4989 - - mtr:MTR_0002s1270 140.198