Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4982 ATGAACTTTAGGGTTTTTTTGTTGGAGGAGAATATAGTTGGTGCAATTTCTTTGCCTATTTTGTTACTTTTATGTATCAATGCACTTCCTAATGTGTGTGCAAGGGAACAAAGTGAAATAGAACAAAGGTTACTTGAAGAAGGGATTGAATCTTTAAGTTTGGAAAAAGCTAGTTTATGGAGCTTACTTACATTCACTTGGTTGAATCCAATTTTTAAAACGGGTCGAATTCGGAAGCTTGAACATGTACATGTTCCTTGTGTTCCTCACTCTGAAACTGCTACTATTGCTTCTTCTATGTTGAAAGAATCTATTCGGAAACAAAAACTTGAAGGAGTTAATACTGTTGCCTCCTATATTGGTCCATTGTTGATATCAAGCTTTGTAAACTTTTTGTTATGCAACAATGACAATTCAAGCAATCAATATGGACTGATTATTGCCTCCATTCCCTTCCTCTCAAAAACTGTGGAGTCACTGAGTCAGAGACAATGGTACTTTGGTGCTCAAAGAATAGGAATTCGAGTCCGAGCAGCTCTTATGGCACAAGTTTATAGCAAGTCTCTATTAGTCAAGTGTGGTGTACCAAAAGATGACATTTTTGGCTTTGATCATCTTATGCAGAAACTTCTCCGGCTTAGGGACACTGAAATGAGCTGGGTGAATAAATTCCTCCATTCAAGTTCAGCAGTAGCCACTCTTTTCTGGACAACTCCGACTTTGGTTTCTGTTTTCACTTTTGGGGCTTGTATATTGGTGAAGACTGAGCTAACTGCGGCGACAGTTCTTTCAGCTCTTGCAACATTCCGCATTCTACAAGAGCCAATTTACAATATGCCTGAGCTTATATCCATGATTACTCAAACCAAAGTATCAGTTGATCGAATCCACAAGTTCGTTGAAGAAGAAGATCAAAATCAATTCATTAATAGGCCTGCTTCCGAATCTTCTACAGTTTCTATTGAAATCAAGCCGGCAGAATATGCATGGGAAGCAAATGATAAAACCACCACCAAGAATCCAACAATTACAATTAAAGAATCATTTATGATAAAGAAAGGTTACAAGGTAGCGATTTGCGGACCAGTAGGGTCCGGAAAATCAAGTTTGCTTCTCAGTATGCTTGGTGAGATTCCACTGGTTTCTGGGGAAGCAACCGAAGTTTATGGAACCAGAAGCTATGTGCCTCAGAGTCCATGGATCCAATCAGGAACTGATATCGAAATATGGAGGCCATATGGAGATTTGACCCCTGTGGAGGAGAGGGGCATCAACTTAAGTGGAGGGCAGAAACAACGAATTCAGCTGGCAAGAGCGGTCTATAATGACTCGGATATTTATTTCCTTGACGATCCTTTTAGCGCTGTTGATGCTCACACCGGAAGTCATTTGTTTAAGGAATGTCTTCTGAAACTGTTGTGTGATAAAACAGTTGTTTATGCGACACATCAGATGGAATTCTTGGAAGCCGCAGATGTTATTTTGGTTATGAAAGATGGACAAATAGTTGAGTCGGGAAGCTATAGAGATCTCACAGAATGTCCTGATAGAAAACTTGTCCAACTAATGGCGGATCATAAAGAAACATTAAAACAAATTCGATCTCAAGAAGAAGATGATTCTGTTAGCTGCAACTGTACACCCTGCCCAAAAAATCTAACTGAAATTGATGAGCAAAATGGTCAGGAGATCGCCAAGGATGGGACGAAAACTAGAGAAGAGGAAGCAATGACCGGTCAAGTAAAATGGAGTGTTTACTCGACCTTTGTCACATTGGCATACAAAGGAGCACTTGTTCCGGTTATTCTCATCTGTCAAATTCTCTTTCAAGCTATGCAGATGGGAAGTAACTATTGGATTTCTTGGGCTGCAGAACAAAGGGGCAGGGTCAATAATGGACGGCTTATAGGAATATTTGCCCTTATGTCTGGTGCGAGCTCCATCTTCATCTTGAGAAGGACTGTTTTAATGACAATAGTTTCGGTCGAGACAGCTAGACACCTTTATCATGGAATGACCACATCAGTTTTCAGGGCACCTATTTCCTTTTTTGATAACACACCTTCAAGCCGAATTTTGACTAGGTCATCTACAGATCAAACAAGGGCAGATAGTGACATTCCATACAGATTAGCTGGACTAGTCTTTGCACTAATCCAGTTATTAAGCTTACTACACCACTACAGCCAGGGAATTGGCCAGGATGGTAGGGATTCGAAAGACACCGATCTTGCATCACTTCTCGGAATCAATAGCTGGGGCTATGACAATCCGGTGTTTCAATCAAGAGAAAATATTCTTGACAAGGCTATGTCATTAATCGATGATTATTCTCGTGTAGCCTTTCACAACTATGCCACTATGGAATGGCTGTCTGTTAGAATTAATTTTCTCTTTAATTTGGTCTTCTATTTTGTTCTCGTCATTTTGGTTACTTTGCCGAGGTCTTCCATCGATCCAAGCTTGGGTGACGTCGAGAACAAAATGATATCAGTAGAGAGAATATTACAATTCTCTACTATACCTTCTGAAGCACCACTGGTTATTCAAGATTGCAGGCCGGCACCAGAGTGGCCTAGCGAAGGAAAAATCGAAATGCACAACCTACATATACAATATGATCCTGCTGCTCCCGTGGTTCTCAAAGATGTCACTTGTGTCTTCCCAGGACATAAAAAAATCGGAGTAGTAGGCCGTACAGGGAGTGGGAAATCTACTATGGTGCGAGCCCTCTTTCGAGTGATGGAGCCTTTAAAAGGATGTATAGTGATTGATGGTGTAAATATTTCCAATATTGGTCTGCATGATTTAAGGTCCAAGCTTGGCATAATTCCTCAGGATCCGACCTTGTTTTTAGGCACCGTAAGGACTAACTTGGATCCTTTGGAAGAACAAACAGATGAAGAACTTTGGGAGGTTCTCCGCAAGTGCCATCTCGCTGAAATAGTACGACAAGATCCAAGGCTTCTTGATGCACCAGTAGCTGAGAATGGAGAAAATTGGAGCCTCGGACAGCGACAACTAGTTTGTCTTGCTAGGCTGTTGCTGAATAAAAGAAGAATTTTGGTCCTAGATGAGGCAACTGCATCCATAGACACAAAAACTGATTGTTTAATTCAGAAAACTATCAGGGAAGAAACGAGTGATTGCACCGTCATTACAGTAGCGCACAGAATTCCTACCGTCATTGATAATGATATGGTTTTAGTCCTCAACGAAGGTAGAATTTTGGAGTATGATAGCCCAGCTCGATTGCTACGTGACCAATCTTCTTCGTTCTCAAAGTTGGTGTCAGAATTTTCGAGGAGATCATCCCAAAGTTAA 3324 0.4085 MNFRVFLLEENIVGAISLPILLLLCINALPNVCAREQSEIEQRLLEEGIESLSLEKASLWSLLTFTWLNPIFKTGRIRKLEHVHVPCVPHSETATIASSMLKESIRKQKLEGVNTVASYIGPLLISSFVNFLLCNNDNSSNQYGLIIASIPFLSKTVESLSQRQWYFGAQRIGIRVRAALMAQVYSKSLLVKCGVPKDDIFGFDHLMQKLLRLRDTEMSWVNKFLHSSSAVATLFWTTPTLVSVFTFGACILVKTELTAATVLSALATFRILQEPIYNMPELISMITQTKVSVDRIHKFVEEEDQNQFINRPASESSTVSIEIKPAEYAWEANDKTTTKNPTITIKESFMIKKGYKVAICGPVGSGKSSLLLSMLGEIPLVSGEATEVYGTRSYVPQSPWIQSGTDIEIWRPYGDLTPVEERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGSHLFKECLLKLLCDKTVVYATHQMEFLEAADVILVMKDGQIVESGSYRDLTECPDRKLVQLMADHKETLKQIRSQEEDDSVSCNCTPCPKNLTEIDEQNGQEIAKDGTKTREEEAMTGQVKWSVYSTFVTLAYKGALVPVILICQILFQAMQMGSNYWISWAAEQRGRVNNGRLIGIFALMSGASSIFILRRTVLMTIVSVETARHLYHGMTTSVFRAPISFFDNTPSSRILTRSSTDQTRADSDIPYRLAGLVFALIQLLSLLHHYSQGIGQDGRDSKDTDLASLLGINSWGYDNPVFQSRENILDKAMSLIDDYSRVAFHNYATMEWLSVRINFLFNLVFYFVLVILVTLPRSSIDPSLGDVENKMISVERILQFSTIPSEAPLVIQDCRPAPEWPSEGKIEMHNLHIQYDPAAPVVLKDVTCVFPGHKKIGVVGRTGSGKSTMVRALFRVMEPLKGCIVIDGVNISNIGLHDLRSKLGIIPQDPTLFLGTVRTNLDPLEEQTDEELWEVLRKCHLAEIVRQDPRLLDAPVAENGENWSLGQRQLVCLARLLLNKRRILVLDEATASIDTKTDCLIQKTIREETSDCTVITVAHRIPTVIDNDMVLVLNEGRILEYDSPARLLRDQSSSFSKLVSEFSRRSSQS* 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4982 1107 PANTHER OS01G0902100 PROTEIN 760 1106 - -
Mal2g4982 1107 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 760 1106 - -
Mal2g4982 1107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 856 1089 IPR027417 -
Mal2g4982 1107 Pfam ABC transporter 881 1029 IPR003439 GO:0005524
Mal2g4982 1107 SUPERFAMILY ABC transporter transmembrane region 205 304 IPR036640 GO:0005524|GO:0016021
Mal2g4982 1107 Gene3D - 409 545 IPR027417 -
Mal2g4982 1107 SUPERFAMILY ABC transporter transmembrane region 601 724 IPR036640 GO:0005524|GO:0016021
Mal2g4982 1107 Gene3D - 316 408 IPR027417 -
Mal2g4982 1107 CDD ABCC_MRP_domain1 321 501 - -
Mal2g4982 1107 Coils Coil 519 539 - -
Mal2g4982 1107 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 601 725 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g4982 1107 Gene3D ABC transporter type 1, transmembrane domain 202 307 IPR036640 GO:0005524|GO:0016021
Mal2g4982 1107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 347 525 IPR027417 -
Mal2g4982 1107 Pfam ABC transporter transmembrane region 604 724 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g4982 1107 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 321 524 IPR003439 GO:0005524
Mal2g4982 1107 Gene3D ABC transporter type 1, transmembrane domain 548 728 IPR036640 GO:0005524|GO:0016021
Mal2g4982 1107 PANTHER OS01G0902100 PROTEIN 206 730 - -
Mal2g4982 1107 SMART AAA_5 353 501 IPR003593 -
Mal2g4982 1107 SMART AAA_5 890 1083 IPR003593 -
Mal2g4982 1107 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 864 1098 IPR003439 GO:0005524
Mal2g4982 1107 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 4 196 - -
Mal2g4982 1107 ProSitePatterns ABC transporters family signature. 426 440 IPR017871 GO:0005524
Mal2g4982 1107 PANTHER OS01G0902100 PROTEIN 4 196 - -
Mal2g4982 1107 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 206 730 - -
Mal2g4982 1107 Gene3D - 847 1099 IPR027417 -
Mal2g4982 1107 Pfam ABC transporter 348 453 IPR003439 GO:0005524
Mal2g4982 1107 CDD ABCC_MRP_domain2 862 1082 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4982 Mal-Chr2 115348391 115354017 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4982 412 550 Calmodulin-binding Proteins AT2G36910 31.250 6.53e-14 74.7