Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4980 ATGTTAGAAGCTCTCTTAGGAACAACCATCAATGTAGCGTTCTTCTATATGCTTTTGATATGGGTTTTATTCAATAGTTTGAAACTAAGCAAACATAACAATAATCTAAGTTTCAAACACAAACCAACCCTTTTTGCTTCAATCACTGTTTTATTCAATGGTGTTATGTCCGTTTTGAACGTAGCTACTATTTTCTATGATTATAGTTACACCACTAGTGGAGTCATAGGATATAACACTATTTCATTGTCTTTAACTTGGGTTTTAGCAACATTGGTTTCATATTGTTCATTGAAAAAAACACTTGGGGAGAGTAAAAGGTTTCCTATTGTTCTTATTCTTTGGTGGGTCTTTGCTACTATTATTGATATAATCTTATTGACTTTAAAACTAGTCAAAAATTCAAAATCCATGAACTTTAGGGTTTTTTTGTTGGAGGAGAATATAGTTGGTGCAATTTCTTTGCCTATTTTGTTACTTCTATGCATCAATGCACTTCCCAACGTGTGTGTAAGGGAACAAAGTGAAATAGAACAAAGGTTACTTGAAGAAGAGATTGAATCTTTAAGTTTGGAAGAAGAAGAAGATGAAGAGGCTTTCACAAAAGCTAGTTTATGGAGCTTACTTACATTCACTTGGTTGAATCCAATTTTTAAAACGGGTCGAATTCGGAAGCTTGAACATGTACATGTTCCTTGTGTTCCTCACTCGGAAGCTATTATTCTACCTATTTGGAAATCTTTGGCCTTCAATGCAGTTTTAGCAGGAGTTAATACTGTTGCCTCCTATATTGGTCCATTGTTGATATCAAGCTTTGTAAACTTTTTGTTATGCAACAATGACAATTCAAGCAATCAATATGGACTGATTATTGCCTCCATTCTCTTCCTCTCAAAAACTGTGGAGTCACTAAGTCAGAGACAATGGTACTTTGGTGCTCAAAGAATAGGAATTCGAGTCCGAGCAGCTCTTATGACTCAAGTTTATAGCAAGTCTCTATTAGTCAAGTGTGGTGTACCAAAAGATGGTAACATCACCAATTTGATTAATGTGGATGTCGATCGAGTTGGAGACTTTTGCAATCATATACATGAAATTTGGTTGATTCCAGTTCAGACATTTTTGGCTTTGATCATCTTATCAGTAGCCACTCTTTTCTGGACAACTCCGACTTTGGTTTCTGTTTTCACTTTTGGGGCTTGTATATTGGTGAAGACTGAGCTAACTGCGGCGACAGTTCTTTCAGCTCTTGCAACATTCCGCATTCTACAAGAGCCAATTTACAATATGCCTGAGCTTATATCCATGATTACTCAAACCAAAGTATCAGTTGATCGAATCCACAAGTTCGTTGAAGAAGAAGATCGAAATCAATTCATTAATAGGCCTGCTTCCGAATCTTCTACAGTTTCTATTGAAATCAAGCCGGCAGAATATGCATGGGAAGCAAATGATAAAACCACCACCAAGAATCCAACAATTACAATTAAAGAATCATTTATGATAAAGAAAGGTTACAAGGTAGCGATTTGCGGACCAGTAGGGTCCGGAAAATCAAGTTTGCTTCTCAGTATGCTTGGTGAGATTCCACTGGTTTCTGGGGAAGCAACCGAAGTTTATGGAACCAGAAGCTATGTGCCTCAGAGTCCATGGATCCAATCAGGAACTGTGAGAGAAAACATACTCTTCGGAAAGAAAATGGATAAATTCTTCTATGAAAATGTCTTGGATGGTTGTGCATTGAACCAGGATATCGAAATATGGAGGCCATATGGAGATTTGACCCCTGTGGAGGAGAGGGGCATCAACTTAAGTGGAGGGCAGAAACAACGAATTCAGCTGGCAAGAGCGGTCTATAATGACTCGGATATTTATTTCCTTGACGATCCTTTTAGCGCTATTGATGCTCACACCGGAAGTCATTTGTTTAAGGAATGTCTTCTGAAACTGTTGTGTGATAAAACAGTTGTTTATGCGACACATCAGATGGAATTCTTGGAAGCCGCAGATGTTATTTTGGTTATGAAAGATGGACAAATAGTTGAGTCGGGAAGCTATAGAGATCTCACAGAATGTCCTGATAGAAAACTTGTCCAACTAATGGCGGATCATAAAGAAACATTAAAACAAATTCGATCTCAAGAAGAAGATGATTCTGTTAGCTGCAACTGTACACCCTGCCCAAAAAATCTAACTGAAATTGATGAGCAGAATGGTCAGGAAATCGCCAAGGATGGGACGAAAACTAGAGAAGAGGAAGCAATGACCGGTCAAGTAAAATGGAGTGTTTACTCGACCTTTGTCACATTGGCATACAAAGGAGCACTTGTTCCGGTTATTCTCATCTGTCAAATTCTCTTTCAAGCTATGCAGATGGGAAGTAACTATTGGATTTCTTGGGCTGCAGAACAAAGGGGCAGGGTCAATAATGGACGGCTTATAGGAATATTTGCCCTTATGTCTGGTGCGAGCTCCATCTTCATCTTGGGAAGGACTGTTTTAATGACAATAGTTTCGGTCGAGACAGCTAGACACCTTTATCATGGAATGACCACATCAGTTTTCAGGGCACCTATTTCCTTTTTTGATAACACACCTTCAAGCCGAATTTTGACTCGGTCATCTACAGATCAAACAAGGGCAGATAGTGACATTCCATACAGATTAGCTGGACTAGTCTTTGCACTAATCCAGTTATTAAGTATCATTCTCTTAATGTCTCACGCCGCATGGCAAGTCCTTCTTATCTTTTTTGCGGTTTTTGCTATCTCCATCTGGTATCAAGCTTACTACACCACTACAGCCAGGGAATTGGCCAGGATGGTAGGGATTCGAAAGACACCGATCTTGCATCACTTCTCGGAATCAATAGCTGGGGCTACGACAATCCGGTGTTTCAATCAAGAGAAAATATTCTTGACCAAGGCTATGTCATTAATCGATGATTATTCTCGTGTAGCCTTTCACAACTATGCCACTATGGAATGGCTGTCTGTTAGAATTAATTTTCTTTTTAATTTGGTCTTCTATTTTGTTCTCGTCATTTTGGTTACTTTGCCGAGGTCTTCCATCGATCCAAGCTTGGCAGGTCTTGTAGCTACTTATGGTTTGAGCCTGAATGTGCTTCAGGCTTGGGTGATATGGAACCTTTGTGACGTCGAGAACAAAATGATATCAGTAGAGAGAATATTACAATTCTCTACTATACCTTCTGAAGCACCACTGTGGCCTAGCGAAGGAAAAATCGAAATGCACAACCTACATATACAATATGATCCTGCTGCTCCCGTGGTTCTCAAAGATGTCACTTGTGTCTTCCCAGGACATAAAAAAATCGGAGTAGTAGGCCGTACAGGGAGTGGGAAATCTACTATGGTGCGAGCCCTCTTTCGAGTGATGGAGCCTTTAAAAGGATGTATAGTGATTGATGGTGTAAATATTTCCAATATTGGTCTGCATGATTTAAGGTCCAAGCTTGGCATAATTCCTCAGGATCCGACCTTGTTTTTAGGCACCGTAAGGACTAACTTGGATCCTTTGGAAGAACAAACAGATGAAGAACTTTGGGAGGTTCTCCGCAAGTGCCATCTCGCTGAAATAGTACGACAAGATCCAAGGCTTCTTGATGCACCAGTAGCTGAGAATGGAGAAAATTGGAGCCTCGGACAGCGACAACTAGTTTGTCTTGCTAGGCTGTTGCTGAATGAAAGAAGAATTTTGGTCCTAGATGAGGCAACTGCATCCATAGACACAAAAACTGATTGTTTAATTCAGAAAACTATCAGGGAAGAAACGAGTGATTGCACCGTCATTACAGTAGCGCACAGAATTCCTACCGTCATTGATAATGATATGGTTTTAGTCCTCAACGAAGGTAGAATTTTGGAGTATGATAGCCCAGCTCGATTGCTACGTGACCAATCTTCTTCGTTCTCAAAGTTGGTGTCAGAATTTTCGAGGAGATCATCCCAAAGTTAA 3978 0.3969 MLEALLGTTINVAFFYMLLIWVLFNSLKLSKHNNNLSFKHKPTLFASITVLFNGVMSVLNVATIFYDYSYTTSGVIGYNTISLSLTWVLATLVSYCSLKKTLGESKRFPIVLILWWVFATIIDIILLTLKLVKNSKSMNFRVFLLEENIVGAISLPILLLLCINALPNVCVREQSEIEQRLLEEEIESLSLEEEEDEEAFTKASLWSLLTFTWLNPIFKTGRIRKLEHVHVPCVPHSEAIILPIWKSLAFNAVLAGVNTVASYIGPLLISSFVNFLLCNNDNSSNQYGLIIASILFLSKTVESLSQRQWYFGAQRIGIRVRAALMTQVYSKSLLVKCGVPKDGNITNLINVDVDRVGDFCNHIHEIWLIPVQTFLALIILSVATLFWTTPTLVSVFTFGACILVKTELTAATVLSALATFRILQEPIYNMPELISMITQTKVSVDRIHKFVEEEDRNQFINRPASESSTVSIEIKPAEYAWEANDKTTTKNPTITIKESFMIKKGYKVAICGPVGSGKSSLLLSMLGEIPLVSGEATEVYGTRSYVPQSPWIQSGTVRENILFGKKMDKFFYENVLDGCALNQDIEIWRPYGDLTPVEERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAIDAHTGSHLFKECLLKLLCDKTVVYATHQMEFLEAADVILVMKDGQIVESGSYRDLTECPDRKLVQLMADHKETLKQIRSQEEDDSVSCNCTPCPKNLTEIDEQNGQEIAKDGTKTREEEAMTGQVKWSVYSTFVTLAYKGALVPVILICQILFQAMQMGSNYWISWAAEQRGRVNNGRLIGIFALMSGASSIFILGRTVLMTIVSVETARHLYHGMTTSVFRAPISFFDNTPSSRILTRSSTDQTRADSDIPYRLAGLVFALIQLLSIILLMSHAAWQVLLIFFAVFAISIWYQAYYTTTARELARMVGIRKTPILHHFSESIAGATTIRCFNQEKIFLTKAMSLIDDYSRVAFHNYATMEWLSVRINFLFNLVFYFVLVILVTLPRSSIDPSLAGLVATYGLSLNVLQAWVIWNLCDVENKMISVERILQFSTIPSEAPLWPSEGKIEMHNLHIQYDPAAPVVLKDVTCVFPGHKKIGVVGRTGSGKSTMVRALFRVMEPLKGCIVIDGVNISNIGLHDLRSKLGIIPQDPTLFLGTVRTNLDPLEEQTDEELWEVLRKCHLAEIVRQDPRLLDAPVAENGENWSLGQRQLVCLARLLLNERRILVLDEATASIDTKTDCLIQKTIREETSDCTVITVAHRIPTVIDNDMVLVLNEGRILEYDSPARLLRDQSSSFSKLVSEFSRRSSQS* 1326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4980 1325 SUPERFAMILY ABC transporter transmembrane region 241 455 IPR036640 GO:0005524|GO:0016021
Mal2g4980 1325 Coils Coil 697 717 - -
Mal2g4980 1325 CDD ABCC_MRP_domain1 472 679 - -
Mal2g4980 1325 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 779 1055 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g4980 1325 CDD ABCC_MRP_domain2 1080 1300 - -
Mal2g4980 1325 CDD ABC_6TM_ABCC_D2 777 1067 IPR044726 GO:0140359
Mal2g4980 1325 Gene3D ABC transporter type 1, transmembrane domain 741 1070 IPR036640 GO:0005524|GO:0016021
Mal2g4980 1325 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 252 380 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g4980 1325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 472 692 IPR027417 -
Mal2g4980 1325 Pfam ABC transporter 499 631 IPR003439 GO:0005524
Mal2g4980 1325 SMART AAA_5 1108 1301 IPR003593 -
Mal2g4980 1325 SMART AAA_5 504 679 IPR003593 -
Mal2g4980 1325 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 472 702 IPR003439 GO:0005524
Mal2g4980 1325 Gene3D - 487 725 IPR027417 -
Mal2g4980 1325 Gene3D - 1071 1317 IPR027417 -
Mal2g4980 1325 Pfam ABC transporter transmembrane region 782 1022 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g4980 1325 Pfam ABC transporter transmembrane region 251 456 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g4980 1325 Pfam ABC transporter 1099 1247 IPR003439 GO:0005524
Mal2g4980 1325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1073 1307 IPR027417 -
Mal2g4980 1325 Coils Coil 172 199 - -
Mal2g4980 1325 Gene3D ABC transporter type 1, transmembrane domain 385 454 IPR036640 GO:0005524|GO:0016021
Mal2g4980 1325 Gene3D ABC transporter type 1, transmembrane domain 239 384 IPR036640 GO:0005524|GO:0016021
Mal2g4980 1325 PANTHER OS01G0902100 PROTEIN 109 380 - -
Mal2g4980 1325 PANTHER OS01G0902100 PROTEIN 382 1324 - -
Mal2g4980 1325 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 109 380 - -
Mal2g4980 1325 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 382 1324 - -
Mal2g4980 1325 ProSitePatterns ABC transporters family signature. 604 618 IPR017871 GO:0005524
Mal2g4980 1325 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1082 1316 IPR003439 GO:0005524
Mal2g4980 1325 SUPERFAMILY ABC transporter transmembrane region 779 1074 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4980 Mal-Chr2 115268028 115274968 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4980 466 728 Calmodulin-binding Proteins AT2G36910 27.018 1.19e-18 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4980 - - gmx:100809063 1450.65