Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4979 ATGCACTTCCTAATGTATCAAAATCCAATTTTTAAAACGGGTCGAATTCGGAAGCTTGAACATGTACATGTTCCTTGTGTTCCTCAGTCTGAAACTGCTACTATTGCTTCATCTATGTTGAAAGATTCTATTCAAAAACAAAAACTTGAAGGTGGTTCTTTGGCAAAAGCTATTATCCTCCCTATTTGGAAATCTTTGGCCTTCAATGCAGTTTTAGCAGGAATTAATACTATTGCATCCTATATTGGTCCATTGTTGATATCAAGCTTTGTAAATTTTTTGTTATGTAACAATGACAATTCAAGCAATCAATATGGACTGATTATTGCCTCCATTCTCTTCCTCTCAAAAACTGTGGAGTCACTGAGTCAGAGACAATGGTACTTTGGTGCTCAAAGAATAGGAATTCGAGTCCGAGCAGCTCTTATGGCACAAGTTTATAGCAAGTCTTTATTAGTCAAGTGTGGTGTACCAAAAGATGGTAACATCACCAATTTGATTAATGTGGATATCGATCGAGTTGGAGACTTTTGCAATCACATTCATGGAATTTGGTTGATTCCAGTTCAGACATTTTTGGCTTTGATCATCTTATGCATAAATCTAGGTTGGATACCTTCCCTTGTTGCATTTTCCGTCACAACTTTGGTCATGGTGTGTAACACACCTTTGGCCATTATGCAAAAAGGTTTTCACTCGAAAATTATGGAAGCTACGGATGCAAGAATGAAAATGACATTGGAGACCATGAAGAACATGGGAATTTTGAAGTTGCATTCATGGGAATTATCATTCATGCAGAAACTTCTCCGGCTTAGGGACACTGAAATGAGCTGGGTGAATAAATTCCTCCATTCAAGTTCAGCAGTAGCCACTCTTTTCTGGACAACTCCGACTTTGGTTTCTGTTTTCACTTTTGGGGCTTGTATATTGGTGAAGACTGAGCTAACTGCGGCGACAGTTCTTTCAGCTCTTGCAACATTCCGCATTCTACAAGAGCCAATTTACAATATGCCTGAGCTTATATCCATGATTACTCAAACCAAAGTATCAGTTGATCGAATCCACAAGTTCGTTGAAGAAGAAGATCGAAATCAATTCATTAATAGGCCTGCTTCCGAATCTTCTACAGTTTCTATTGAAATCAAGCCGGCAGAATATGCATGGGAAGCAAATGATAAAACCACCACCAAGAATCCAACAATTACAATTAAAGAATCATTTATGATAAAGAAAGGTTACAAGGTAGCGATTTGCGGACCAGTAGGGTCCGGAAAATCAAGTTTGCTTCTCAGTATGCTTGGTGAGATTCCACTGGTTTCTGGGGAAGCAACCGAAGTTTATGGAACCAGAAGCTATGTGCCTCAGAGTCCATGGATCCAATCAGGAACTGTGAGAGAAAACATACTCTTCGGAAAGAAAATGGATAAATTCTTCAATGAAAATGTCTTGGATGGTTGTGCATTGAACCAGGATATCGAAATATGGAGGCCATATGGAGATTTGACCCCTGTGGAGGAGAGGGGCATCAACTTAAGTGGAGGGCAGAAACAACGAATTCAGCTGGCAAGAGCGGTCTATAATGACTCGGATATTTATTTCCTTGACGATCCTTTTAGCGCTATTGATGCTCACACCGGAAGTCATTTGTTTAAGGAATGTCTTCTGAAACTGTTGTGTGATAAAACAGTTGTTTATGCGACACATCAGATGGAATTCTTGGAAGCCGCAGATGTTATTTTGGTTATGAAAGATGGACAAATAGTTGAGTCGGGAAGCTATAGAGATCTCACAGAATGTCCTGATAGAAAACTTGTCCAACTAATGGCGGATCATAAAGAAACATTAAAACAAATTCGATCTCAAGAAGAAGATGATTCTGTTAGCTGCAACTGTACACCCTGCCCAAAAAATCTAACTGAAATTGATGAGCAGAATGGTCAGGAAATCGCCAAGGATGGGACGAAAACTAGAGAAGAGGAAGCAATGACCGGTCAAGTAAAATGGAGTGTTTACTCGACCTTTGTCACATTGGCATACAAAGGAGCACTTGTTCCGGTTATTCTCATCTGTCAAATTCTCTTTCAAGCTATGCAGATGGGAAGTAACTATTGGATTTCTTGGGCTGCAGAACAAAGGGGCAGGGTCAATAATGGACGGCTTATAGGAATATTTGCCCTTATGTCTGGTGCGAGCTCCATCTTCATCTTGGGAAGGACTGTTTTAATGACAATAGTTTCGGTCGAGACAGCTAGACACCTTTATCATGGAATGACCACATCAGTTTTCAGGGCACCTATTTCCTTTTTTGATAACACACCTTCAAGCCGAATTTTGACTAGGTCATCTACAGATCAAACAAGGGCAGATAGTGACATTCCATACAGATTAGCTGGACTAGTCTTTGCACTAATCCAGTTATTAAGTATCATTCTCTTAATGTCTCACGCCGCATGGCAAGTCCTTCTTATCTTTTTTGCGGTTTTTGCTATCTCCATCTGGTATCAAGCTTACTACACCACTACAGCCAGGGAATTGGCCAGGATGGTAGGGATTCGAAAGACACCGATCTTGCATCACTTCTCGGAATCAATAGCTGGGGCTACGACAATCCGGTGTTTCAATCAAGAGAAAATATTCTTGACCAAGGCTATGTCATTAATCGATGATTATTCTCGTGTAGCCTTTCACAACTATGCCACTATGGAATGGCTGTCTGTTAGAATTAATTTTCTTTTTAATTTGGTCTTCTATTTTGTTCTCGTCATTTTGGTTACTTTGCCGAGGTCTTCCATCGATCCAAGCTTGGCAGGTCTTGTAGCTACTTATGGTTTGAGCCTGAATGTGCTTCAGGCTTGGGTGATATGGAACCTTTGTGACGTCGAGAACAAAATGATATCAGTAGAGAGAATATTACAATTCTCTACTATACCTTCTGAAGCACCACTGGTTATTCAAGATTGCAGGCCGGCACCAGAGTGGCCTAGCGAAGGAAAAATCGAAATGCACAACCTACATATACAATATGATCCTGCTGCTCCCGTGGTTCTCAAAGATGTCACTTGTGTCTTCCCAGGACATAAAAAAATCGGAGTAGTAGGCCGTACAGGGAGTGGGAAATCTACTATGGTGCGAGCCCTCTTTCGAGTGATGGAGCCTTTAAAAGGATGTATAGTGATTGATGGTGTAAATATTTCCAATATTGGTCTGCATGATTTAAGGTCCAAGCTTGGCATAATTCCTCAGGATCCGACCTTGTTTTTAGGCACCGTAAGGACTAACTTGGATCCTTTGGAAGAACAAACAGATGAAGAACTTTGGGAGGTTCTCCGCAAGTGCCATCTCGCTGAAATAGTACGACAAGATCCAAGGCTTCTTGATGCACCAGTAGCTGAGAATGGAGAAAATTGGAGCCTCGGACAGCGACAACTAGTTTGTCTTGCTAGGCTGTTGCTGAATGAAAGAAGAATTTTGGTCCTAGATGAGGCAACTGCATCCATAGACACAAAAACTGATTGTTTAATTCAGAAAACTATCAGGGAAGAAACGAGTGATTGCACCGTCATTACAGTAGCGCACAGAATTCCTACCGTCATTGATAATGATATGGTTTTAGTCCTCAACGAAGGTAGAATTTTGGAGTATGATAGCCCAGCTCGATTGCTACGTGACCAATCTTCTTCGTTCTCAAAGTTGGTGTCAGAATTTTCGAGGAGATCATCCCAAAGTTAA 3732 0.4078 MHFLMYQNPIFKTGRIRKLEHVHVPCVPQSETATIASSMLKDSIQKQKLEGGSLAKAIILPIWKSLAFNAVLAGINTIASYIGPLLISSFVNFLLCNNDNSSNQYGLIIASILFLSKTVESLSQRQWYFGAQRIGIRVRAALMAQVYSKSLLVKCGVPKDGNITNLINVDIDRVGDFCNHIHGIWLIPVQTFLALIILCINLGWIPSLVAFSVTTLVMVCNTPLAIMQKGFHSKIMEATDARMKMTLETMKNMGILKLHSWELSFMQKLLRLRDTEMSWVNKFLHSSSAVATLFWTTPTLVSVFTFGACILVKTELTAATVLSALATFRILQEPIYNMPELISMITQTKVSVDRIHKFVEEEDRNQFINRPASESSTVSIEIKPAEYAWEANDKTTTKNPTITIKESFMIKKGYKVAICGPVGSGKSSLLLSMLGEIPLVSGEATEVYGTRSYVPQSPWIQSGTVRENILFGKKMDKFFNENVLDGCALNQDIEIWRPYGDLTPVEERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAIDAHTGSHLFKECLLKLLCDKTVVYATHQMEFLEAADVILVMKDGQIVESGSYRDLTECPDRKLVQLMADHKETLKQIRSQEEDDSVSCNCTPCPKNLTEIDEQNGQEIAKDGTKTREEEAMTGQVKWSVYSTFVTLAYKGALVPVILICQILFQAMQMGSNYWISWAAEQRGRVNNGRLIGIFALMSGASSIFILGRTVLMTIVSVETARHLYHGMTTSVFRAPISFFDNTPSSRILTRSSTDQTRADSDIPYRLAGLVFALIQLLSIILLMSHAAWQVLLIFFAVFAISIWYQAYYTTTARELARMVGIRKTPILHHFSESIAGATTIRCFNQEKIFLTKAMSLIDDYSRVAFHNYATMEWLSVRINFLFNLVFYFVLVILVTLPRSSIDPSLAGLVATYGLSLNVLQAWVIWNLCDVENKMISVERILQFSTIPSEAPLVIQDCRPAPEWPSEGKIEMHNLHIQYDPAAPVVLKDVTCVFPGHKKIGVVGRTGSGKSTMVRALFRVMEPLKGCIVIDGVNISNIGLHDLRSKLGIIPQDPTLFLGTVRTNLDPLEEQTDEELWEVLRKCHLAEIVRQDPRLLDAPVAENGENWSLGQRQLVCLARLLLNERRILVLDEATASIDTKTDCLIQKTIREETSDCTVITVAHRIPTVIDNDMVLVLNEGRILEYDSPARLLRDQSSSFSKLVSEFSRRSSQS* 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4979 1243 CDD ABCC_MRP_domain1 380 587 - -
Mal2g4979 1243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 992 1225 IPR027417 -
Mal2g4979 1243 Pfam ABC transporter transmembrane region 690 930 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g4979 1243 Pfam ABC transporter transmembrane region 69 334 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g4979 1243 CDD ABC_6TM_ABCC_D2 685 975 IPR044726 GO:0140359
Mal2g4979 1243 CDD ABC_6TM_ABCC_D1 68 355 IPR044746 GO:0140359
Mal2g4979 1243 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 687 963 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g4979 1243 Coils Coil 605 625 - -
Mal2g4979 1243 SMART AAA_5 412 587 IPR003593 -
Mal2g4979 1243 SMART AAA_5 1026 1219 IPR003593 -
Mal2g4979 1243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 380 600 IPR027417 -
Mal2g4979 1243 Gene3D - 983 1235 IPR027417 -
Mal2g4979 1243 PANTHER OS01G0902100 PROTEIN 6 1242 - -
Mal2g4979 1243 CDD ABCC_MRP_domain2 998 1218 - -
Mal2g4979 1243 Gene3D ABC transporter type 1, transmembrane domain 38 366 IPR036640 GO:0005524|GO:0016021
Mal2g4979 1243 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 6 1242 - -
Mal2g4979 1243 SUPERFAMILY ABC transporter transmembrane region 687 980 IPR036640 GO:0005524|GO:0016021
Mal2g4979 1243 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 70 347 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g4979 1243 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1000 1234 IPR003439 GO:0005524
Mal2g4979 1243 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 380 610 IPR003439 GO:0005524
Mal2g4979 1243 ProSitePatterns ABC transporters family signature. 512 526 IPR017871 GO:0005524
Mal2g4979 1243 Gene3D - 395 633 IPR027417 -
Mal2g4979 1243 Pfam ABC transporter 1017 1165 IPR003439 GO:0005524
Mal2g4979 1243 Pfam ABC transporter 407 539 IPR003439 GO:0005524
Mal2g4979 1243 Gene3D ABC transporter type 1, transmembrane domain 649 981 IPR036640 GO:0005524|GO:0016021
Mal2g4979 1243 SUPERFAMILY ABC transporter transmembrane region 58 363 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4979 Mal-Chr2 115241604 115247642 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4979 67 636 Calmodulin-binding Proteins AT2G36910 21.474 1.37e-18 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4979 - - gmx:100809063 1863.97