Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4977 ATGACAATAGTTTCGGTCGAGACAGCTAGACACCTTTATCATGGAATGACCACATCAGTTTTCAGGGCACCTATTTCCTTTTTTGATAACACACCTTCAAGCCGAATTTTGACTAGGTCATCTACAGATCAAACAAGGGCAGATAGTGACATTCCATACAGATTAGCTGGACTAGTCTTTGCACTAATCCAGTTATTAAGTATCGTTCTCTTAATGTCTCACGCCGCATGGCAAGTCCTTCTTATCTTTTTTGCGGTTTTTGCTATCTCCATCTGGTATCAAGCTTACTACACCACTACAGCCAGGGAATTGGCCAGGATGGTAGGGATTCGAAAGACACCGATCTTGCATCACTTCTCGGAATCAATAGCTGGGGCTACGACAATCCGGTGTTTCAATCAAGAGAAAATATTCTTGACCAAGGCTATGTCATTAATCGATGATTATTCTCGTGTAGCCTTTCACAACTATGCCACTATGGAATGGCTGTCTGTTAGAATTAATTTTCTCTTTAATTTGGTCTTCTATTTTGTTCTCGTCATTTTGGTTACTTTGCCGAGGTCTTCCATCGATCCAAGCTTGGCAGGTCTTGTAGCTACTTATGGTTTGAGCCTGAATGTGCTTCAGGCTTGGGTGATATGGAACCTTTGTGACGTCGAGAACAAAATGATATCAGTAGAGAGAATATTACAATTCTCTACTATACCTTCTGAAGCACCACTGGTTATTCAAGATTGCAGGCCGACACCAGAGTGGCCTAGCGAAGGAAAAATCGAAATGCACAACCTACATATACAATATGATCTTGCTGCTCCCGTGGTTCTCAAAGATGTCACTTGTGTCTTCCCAGGACATAAAAAAATCGGAGTAGTAGGCCGTACAGGGAGTGGGAAATCTACTATGGTGCGAGCCCTCTTTCGAGTGATGGAGCCTTTAAAAGGATGTATAGTGATTGATGGTGTAAATATTTCCAATATTGGTCTGCATGATTTAAGGTCCAAGCTTGGCATAATTCCTCAGGATCCGACCTTGTTTTTAGGCACCGTAAGGACTAACTTGGATCCTTTGGAAGAACAAACAGATGAAGAACTTTGGGAGGTTCTCCGCAAGTGCCATCTCGCTGAAATAGTACGACAAGATCCAAGGCTTCTTGATGCACCAGTAGCTGAGAATGGAGAAAATTGGAGCCTCGGACAGCGACAACTAGTTTGTCTTGCTAGGCTGTTGCTGAATAAAAGAAGAATTTTGGTCCTAGATGAGGCAACTGCATCCATAGACACAAAAACTGATTGTTTAATTCAGAAAACTATCAGGGAAGAAACGAGTGATTGCACCGTCATTACAGTAGCGCACAGAATTCCTACCGTCATTGATAATGATATGGTTTTAGTCCTCAACGAAGGTAGAATTTTGGAGTATGATAGCCCAGCTCGATTGCTACGTGACCAATCTTCTTCGTTCTCAAAGTTGGTGTCAGAATTTTCGAGGAGATCATCCCAAAGTTAA 1506 0.4216 MTIVSVETARHLYHGMTTSVFRAPISFFDNTPSSRILTRSSTDQTRADSDIPYRLAGLVFALIQLLSIVLLMSHAAWQVLLIFFAVFAISIWYQAYYTTTARELARMVGIRKTPILHHFSESIAGATTIRCFNQEKIFLTKAMSLIDDYSRVAFHNYATMEWLSVRINFLFNLVFYFVLVILVTLPRSSIDPSLAGLVATYGLSLNVLQAWVIWNLCDVENKMISVERILQFSTIPSEAPLVIQDCRPTPEWPSEGKIEMHNLHIQYDLAAPVVLKDVTCVFPGHKKIGVVGRTGSGKSTMVRALFRVMEPLKGCIVIDGVNISNIGLHDLRSKLGIIPQDPTLFLGTVRTNLDPLEEQTDEELWEVLRKCHLAEIVRQDPRLLDAPVAENGENWSLGQRQLVCLARLLLNKRRILVLDEATASIDTKTDCLIQKTIREETSDCTVITVAHRIPTVIDNDMVLVLNEGRILEYDSPARLLRDQSSSFSKLVSEFSRRSSQS* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4977 501 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 258 492 IPR003439 GO:0005524
Mal2g4977 501 CDD ABCC_MRP_domain2 256 476 - -
Mal2g4977 501 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 4 500 - -
Mal2g4977 501 SMART AAA_5 284 477 IPR003593 -
Mal2g4977 501 PANTHER OS01G0902100 PROTEIN 4 500 - -
Mal2g4977 501 Gene3D - 241 494 IPR027417 -
Mal2g4977 501 Pfam ABC transporter 275 423 IPR003439 GO:0005524
Mal2g4977 501 Gene3D ABC transporter type 1, transmembrane domain 1 239 IPR036640 GO:0005524|GO:0016021
Mal2g4977 501 SUPERFAMILY ABC transporter transmembrane region 2 238 IPR036640 GO:0005524|GO:0016021
Mal2g4977 501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 249 483 IPR027417 -
Mal2g4977 501 CDD ABC_6TM_ABCC_D2 1 233 IPR044726 GO:0140359
Mal2g4977 501 Pfam ABC transporter transmembrane region 11 188 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g4977 501 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 221 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4977 Mal-Chr2 115215259 115218085 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4977 243 491 Calmodulin-binding Proteins AT2G36910 30.268 6.14e-32 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4977 - - gmx:100809063 831.632