Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4976 ATGGTAGCCCTTTTCTTTTTGGCTGCTTCACTCACCTATCAGTATTCGGTGGTGCACCTTAATCCATCCTATAGATCGTTGGCTACATTAACTTTACACATTCTCTATGTTTTTCTTCATTATACATATTGCAACCTTAGAGTGAGTAAAAGAAAAGTAAAGAGAGAAACCCTTGAAGTTCAACAACCAACCATAGCCATGTTAGAAGCTCTCTTAGGAACAACCATCAATGTAGCGTTCTTCTATATGCTTTTGATATGGGTTTTATTCAATAGTTTGAAACTAAGCAAACATAACAATAATCTAAGTTTCAAACACAAACCAACCCTTTTTGCTTCAATCACTGTTTTATTCAATGGTGTTATGTCCGTTTTGAACGTAGCTACTATTTTCTATGATTATAGTTACACCACTAGTGGAGTCATAGGATATAACACTATTTCATTGTCTTTAACTTGGGTTTTAGCAACATTGGTTTCATATTATTCATTGAAAAAAACACTTGGGGAGAGTAAAAGGTTTCCTATTGTTCTTATTCTTTGGTGGGTCTTTGCTACTATTATTGATATAATCTTATTGACTTTAAAACTAGTCAAAATTTCAAAATCCATGAACTTTAGGGTTTTTTTGTTGGAGGAGAATATAGTTGGTGCAATTTCTTTGCCTATTTTGTTACTTTTATGTATCAATGCACTTCCTAATGTGTGTGCAAGGGAACAAAGTGAAATAGAACAAAGGTTACTTGAAGAAGAGATTGAATCTTTAAGTTTGGAAGAAGAAGAAGATGAAGAGGCTTTCACAAAAGCTAGTTTATGGAGCTTACTTACATTCACTTGGTTGAATCCAATTTTTAAAACGGGTCGAATTCGGAAGCTTGAACATGTACATGTTCCTTGTGTTCCTCAGTCTGAAACTGCTACTATTGCTTCATCTATGTTGAAAGATTCTATTCAAAAACAAAAACTTGAAGGTGGTTCTTTGGCAAAAGCTATTATCCTCCCTATTTGGAAATCTTTGGCCTTCAATGCAGTTTTAGCAGGAATTAATACTATTGCATCCTATATTGGTCCATTGTTGATATCAAGCTTTGTAAATTTTTTGTTATGTAACAATGACAATTCAAGCAATCAATATGGACTGATTATTGCCTCCATTCTCTTCCTCTCAAAAACTGTGGAGTCACTGAGTCAGAGACAATGGTACTTTGGTGCTCAAAGAATAGGAATTCGAGTCCGAGCAGCTCTTATGGCACAAGTTTATAGCAAGTCTTTATTAGTCAAGTGTGGTGTACCAAAAGATGGTAACATCACCAATTTGATTAATGTGGATATCGATCGAGTTGGAGACTTTTGCAATCACATTCATGGAATTTGGTTGATTCCAGTTCAGACATTTTTGGCTTTGATCATCTTATGCATAAATCTAGGTTGGATACCTTCCCTTGTTGCATTTTCCGTCACAACTTTGGTCATGGTGTGTAACACACCTTTGGCCATTATGCAAAAAGGTTTTCACTCGAAAATTATGGAAGCTACGGATGCAAGAATGAAAATGACATCGGAGACCATGAAGAACATGGGAATTTTGAAGTTGCATTCATGGGAATTATCATTCATGCAGAAACTTCTCCGGCTTAGGGACACTGAAATGAGCTGGGTGAATAAATTCCTCCATTCAAGTTCAGCAGTAGCCACTCTTTTCTGGACAACTCCGACTTTGGTTTCTGTTTTCACTTTTGGGGCTTGTATATTGGTGAAGACTGAGCTAACTGCGGCGACAGTTCTTTCAGCTCTTGCAACATTCCGCATTCTACAAGAGCCAATTTACAATATGCCTGAGCTTATATCCATGATTACTCAAACCAAAGTATCAGTTGATCGAATCCACAAGTTCGTTGAAGAAGAAGATCAAAATCAATTCATTAATAGGCCTGCTTCCGAATCTTCTACAGTTTCTATTGAAATCAAGCCGGCAGAATATGCATGGGAAGCAAATGATAAAACCACCACCAAGAATCCAACAATTACAATTAAAGAATCATTTATGATAAAGAAAGGTTACAAGGTAGCGATTTGCGGACCAGTAGGGTCCGGAAAATCAAGTTTTCTTCTCAGTATGCTTGGTGAGATTCCACTGGTTTCTGGGGAAGCAACCGAAGTTTATGGAACCAGAAGCTATGTGCCTCAGAGTCCATGGATCCAATCAGGAACTGTGAGAGAAAACATACTCTTCGGAAAGAAAATGGATAAATTCTTCTATGAAAATGTCTTGGATGGTTGTGCATTGAACCAGGATATCGAAATATGGAGGCCATATGGAGATTTGACCCCTGTGGAGGAGAGGGGCATCAACTTAAGTGGAGGGCAGAAACAACGAATTCAGCTGGCAAGAGCGGTCTATAATGACTCGGATATTTATTTCCTTGACGATCCTTTTAGCGCTGTTGATGCTCACACCGGAAGTCATTTGTTTAAGGAATGTCTTCTGAAACTGTTGTGTGATAAAACAGTTGTTTATGCGACACATCAGATGGAATTCTTGGAAGCCGCAGATGTTATTTTGGTTATGAAAGATGGACAAATAGTTGAGTCGGGAAGCTATAGAGATCTCACAGAATGTCCTGATAGAAAACTTGTCCAACTAATGGCGGATCATAAAGAAACATTAAAACAAATTCGATCTCAAGAAGAAGATGATTCTGTTAGCTGCAACTGTACACCCTGCCCAAAAAATCTAACTGAAATTGATGAGCAGAATGGTCAGGAGATCGCCAAGGATGGGACGAAAACTAGAGAAGAGGAAGCAATGACCGGTCAAGTAAAATGGAGTGTTTACTCGACCTTTGTCACATTGGCATACAAAGGAGCACTTGTTCCGGTTATTCTCATCTGTCAAATTCTCTTTCAAGCTATGCAGATGGGAAGGGCAGGGGTCAATAATGGACGGCTTATAGGAATATTTGCCCTTATGTCTGGTGCGAGCTCCATCTTCATCTTGGGAAGGACTGTTTTAATGACAATAGTTTCGGTCGAGACAGCTAGACACCTTTATCATAGAATGACCACATCAGTTTTCAGGGCACCTATTTCCTTTTTTGATAACACACCTTCAAGCCGAATTTTGACTAGGTCATCTACAGATCAAGCAAGGGCAGATAGTGACATTCCATACAGATTAGCTGGACTAGTCTTTGCACTAATCCAGTTATTAAGTATCATTCTCTTAATGTCTCACGCCGCATGGCAAGTCCTTCTTATCTTTTTTGCGGTTTTTGCTATCTCCATCTGGTATCAAGCTTACTACACCACTACAGCCAGGGAATTGGCCAGGATGGTAGGGATTCGAAAGACACCGATCTTGCATCACTTCTCGGAATCAATAGCTGGGGCTACGACAATCCGGTGTTTCAATCAAGAGAAAATATTCTTGACCAAGGCTATGTCATTAATCGATGATTATTCTCGTGTAGCCTTTCACAACTATGCCACTATGGAATGGCTGTCTGTTAGAATTAATTTTCTCTTTAATTTGGTCTTCTATTTTGTTCTCGTCATTTTGGTTACTTTGCCGAGGTCTTCCATCGATCCAAGCTTGGCAGGTCTTGTAGCTACTTATGGTTTGAGCCTGAATGTGCTTCAGGCTTGGGTGATATGGAACCTTTGTGACGTCGAGAACAAAATGATATCAGTAGAGAGAATATTACAATTCTCTACTATACCTTCTGAAGCACCACTGGTTATTCAAGATTGCAGGCCGGCACCAGAGTGGCCTAGCGAAGGAAAAATCGAAATGCACAACCTACATATACAATATGATCCTGCTGCTCCCGTGGTTCTCAAAGATGTCACTTGTGTCTTCCCAGGACATAAAAAAATCGGAGTAGTAGGCCGTACAGGGAGTGGGAAATCTACTATGGTGCGAGCCCTCTTTCGAGTGATGGAGCCTTTAAAAGGATGTATAGTGATTGATGGTGTAAATATTTCCAATATTGGTCTGCATGATTTAAGGTCCAAGCTTGGCATAATTCCTCAGGATCCGACCTTGTTTTTAGGCACCGTAAGGACTAACTTGGATCCTTTGGAAGAACAAACAGATGAAGAACTTTGGGAGGTTCTCCGCAAGTGCCATCTCGCTGAAATAGTACGACAAGATCCAAGGCTTCTTGATGCACCAGTAGCTGAGAATGGAGAAAATTGGAGCCTCGGACAGCGACAACTAGTTTGTCTTGCTAGGCTGTTGCTGAATAAAAGAAGAATTTTGGTCCTAGATGAGGCAACTGCATCCATAGACACTAAAACTGATTGTTTAATTCAGAAAACTATCAGGGAAGAAACGAGTGATTGCACCGTCATTACAGTAGCGCACAGAATTCCTACCGTCATTGATAATGATATGGTTTTAGTCCTCAACGAAGGTAGAATTTTGGAGTATGATAGCCCAGCTCGATTGCTACGTGACCAATCTTCTTCGTTCTCAAAGTTGGTGTCAGAATTTTCGAGGAGATCATCCCAAAGTTAA 4518 0.3949 MVALFFLAASLTYQYSVVHLNPSYRSLATLTLHILYVFLHYTYCNLRVSKRKVKRETLEVQQPTIAMLEALLGTTINVAFFYMLLIWVLFNSLKLSKHNNNLSFKHKPTLFASITVLFNGVMSVLNVATIFYDYSYTTSGVIGYNTISLSLTWVLATLVSYYSLKKTLGESKRFPIVLILWWVFATIIDIILLTLKLVKISKSMNFRVFLLEENIVGAISLPILLLLCINALPNVCAREQSEIEQRLLEEEIESLSLEEEEDEEAFTKASLWSLLTFTWLNPIFKTGRIRKLEHVHVPCVPQSETATIASSMLKDSIQKQKLEGGSLAKAIILPIWKSLAFNAVLAGINTIASYIGPLLISSFVNFLLCNNDNSSNQYGLIIASILFLSKTVESLSQRQWYFGAQRIGIRVRAALMAQVYSKSLLVKCGVPKDGNITNLINVDIDRVGDFCNHIHGIWLIPVQTFLALIILCINLGWIPSLVAFSVTTLVMVCNTPLAIMQKGFHSKIMEATDARMKMTSETMKNMGILKLHSWELSFMQKLLRLRDTEMSWVNKFLHSSSAVATLFWTTPTLVSVFTFGACILVKTELTAATVLSALATFRILQEPIYNMPELISMITQTKVSVDRIHKFVEEEDQNQFINRPASESSTVSIEIKPAEYAWEANDKTTTKNPTITIKESFMIKKGYKVAICGPVGSGKSSFLLSMLGEIPLVSGEATEVYGTRSYVPQSPWIQSGTVRENILFGKKMDKFFYENVLDGCALNQDIEIWRPYGDLTPVEERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGSHLFKECLLKLLCDKTVVYATHQMEFLEAADVILVMKDGQIVESGSYRDLTECPDRKLVQLMADHKETLKQIRSQEEDDSVSCNCTPCPKNLTEIDEQNGQEIAKDGTKTREEEAMTGQVKWSVYSTFVTLAYKGALVPVILICQILFQAMQMGRAGVNNGRLIGIFALMSGASSIFILGRTVLMTIVSVETARHLYHRMTTSVFRAPISFFDNTPSSRILTRSSTDQARADSDIPYRLAGLVFALIQLLSIILLMSHAAWQVLLIFFAVFAISIWYQAYYTTTARELARMVGIRKTPILHHFSESIAGATTIRCFNQEKIFLTKAMSLIDDYSRVAFHNYATMEWLSVRINFLFNLVFYFVLVILVTLPRSSIDPSLAGLVATYGLSLNVLQAWVIWNLCDVENKMISVERILQFSTIPSEAPLVIQDCRPAPEWPSEGKIEMHNLHIQYDPAAPVVLKDVTCVFPGHKKIGVVGRTGSGKSTMVRALFRVMEPLKGCIVIDGVNISNIGLHDLRSKLGIIPQDPTLFLGTVRTNLDPLEEQTDEELWEVLRKCHLAEIVRQDPRLLDAPVAENGENWSLGQRQLVCLARLLLNKRRILVLDEATASIDTKTDCLIQKTIREETSDCTVITVAHRIPTVIDNDMVLVLNEGRILEYDSPARLLRDQSSSFSKLVSEFSRRSSQS* 1506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4976 1505 Coils Coil 878 898 - -
Mal2g4976 1505 Pfam ABC transporter 680 812 IPR003439 GO:0005524
Mal2g4976 1505 Pfam ABC transporter transmembrane region 981 1192 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g4976 1505 Pfam ABC transporter transmembrane region 342 607 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g4976 1505 Gene3D ABC transporter type 1, transmembrane domain 923 1243 IPR036640 GO:0005524|GO:0016021
Mal2g4976 1505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 653 873 IPR027417 -
Mal2g4976 1505 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 946 1225 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g4976 1505 Coils Coil 238 265 - -
Mal2g4976 1505 Pfam ABC transporter 1279 1427 IPR003439 GO:0005524
Mal2g4976 1505 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 653 883 IPR003439 GO:0005524
Mal2g4976 1505 ProSitePatterns ABC transporters family signature. 785 799 IPR017871 GO:0005524
Mal2g4976 1505 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 343 620 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g4976 1505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1254 1487 IPR027417 -
Mal2g4976 1505 CDD ABC_6TM_ABCC_D1 341 628 IPR044746 GO:0140359
Mal2g4976 1505 CDD ABCC_MRP_domain1 653 860 - -
Mal2g4976 1505 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1262 1496 IPR003439 GO:0005524
Mal2g4976 1505 PANTHER OS01G0902100 PROTEIN 175 1504 - -
Mal2g4976 1505 SUPERFAMILY ABC transporter transmembrane region 941 1242 IPR036640 GO:0005524|GO:0016021
Mal2g4976 1505 Gene3D ABC transporter type 1, transmembrane domain 310 639 IPR036640 GO:0005524|GO:0016021
Mal2g4976 1505 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 175 1504 - -
Mal2g4976 1505 Gene3D - 668 906 IPR027417 -
Mal2g4976 1505 SUPERFAMILY ABC transporter transmembrane region 331 636 IPR036640 GO:0005524|GO:0016021
Mal2g4976 1505 Gene3D - 1245 1497 IPR027417 -
Mal2g4976 1505 SMART AAA_5 1288 1481 IPR003593 -
Mal2g4976 1505 SMART AAA_5 685 860 IPR003593 -
Mal2g4976 1505 CDD ABC_6TM_ABCC_D2 958 1237 IPR044726 GO:0140359
Mal2g4976 1505 CDD ABCC_MRP_domain2 1260 1480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4976 Mal-Chr2 115174572 115184235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4976 647 909 Calmodulin-binding Proteins AT2G36910 27.113 1.79e-18 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4976 - - gmx:100809063 2002.64