Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4960 ATGGACAGTCGTTCGCCATATCACTGGCTGAGGGAATTAAGATGCGACTCTCAGAGCTCAAATCCATTACTCGCTCTTATTGAGTGTGCTAAATGTGTTGCGTCTGGAAGCATAAAAAATGCAGATATAGGACTTGAGTATATTTCTCAGATTTCATCACCTGATGGTAATGCTGTACAAAGATTGGTCACTTATTTCAGTGAAGCACTTGGATACAAGATAGTTAAACATTTACCTGGAGTATACAAAGCTCTCAATTCCTCGAAAACATCATTGTCTTCAGACGATATCCTTGTTCAGAAATACTTCTATGAACTGTGTCCCTTTTTGAAGTTTTCATACCTGATCACAAATCAAGCAATTGTTGAATCAATGGAAAGTGAAAAAGTTGTTCATATTATTGATCTCCATTGTTCCGAGCCAGCTCAATGGATAAATCTTATACAAACTTTAAAGAAACGTCCGGGAGGTCCGCCCTTTCTGAAAATTACAGGAATTCATGAAAAGAAAGAAGTATTGGAGCAAATGAGCTTTCATTTGACAACTGAAGCAGGGATTTTGGATTTTCCTTTACAGTTCAATCCAATAGTTAGCAAACTCGAAGATGTAGATTTCAAAAAATTGCCTGTCATTACAGGAGATGCTGTTGCAATTACTTCTGTTCTTCAGCTGCATTCTCTCCTTGCCACTGATGATGAAATGATCTCAACAGCAGGACCGGTATCTATTAATCTGCAGAGAGCGTTTCACATGAGTCAGAGGACTTTCGCAGAGTGGCTCGAGAGAGATATGATAAATGCATATATTTTGAGTCCTGACTCGGCATTATCACCTCTCTTTTTAGGTGCTTCACCTAAGATGGGGATCTTTCTTAACGCTATGCGAAAACTACAACCAAAACTTTTAGTGATTACTGAACAGGAATCAAATCTAAATGGATGTAATTTAACGGAGAGAATCGATCGAGCATTGTACTTTTACGGTTCACTTTTTGACTGTTTGGAAGATACTGTTACGAGAACATCAGTGGAGAGACAAAAACTCGAGAGCATGCTTTTTGGAGAGCAAATAAAGAACATCATTACTTGTGATGGAGTCGATAGAAAGGAAAGGCATGAGAAGCTCGAGAAATGGATTCAAAGACTCAAAATGGCTGGATTTGTGAAGGTACCTTTGAGTTATAATGGGAGGATAGAAGCAACAAACCTATTGCAGAGATATAGTCATAAATACAAGCTTAAAGAAGAAAATGATTGTTTACTTGTCTGTTGGAGTGATAGACCACTCTTTTCTGTATCAGCTTGGAAATTTAGGTGA 1317 0.3804 MDSRSPYHWLRELRCDSQSSNPLLALIECAKCVASGSIKNADIGLEYISQISSPDGNAVQRLVTYFSEALGYKIVKHLPGVYKALNSSKTSLSSDDILVQKYFYELCPFLKFSYLITNQAIVESMESEKVVHIIDLHCSEPAQWINLIQTLKKRPGGPPFLKITGIHEKKEVLEQMSFHLTTEAGILDFPLQFNPIVSKLEDVDFKKLPVITGDAVAITSVLQLHSLLATDDEMISTAGPVSINLQRAFHMSQRTFAEWLERDMINAYILSPDSALSPLFLGASPKMGIFLNAMRKLQPKLLVITEQESNLNGCNLTERIDRALYFYGSLFDCLEDTVTRTSVERQKLESMLFGEQIKNIITCDGVDRKERHEKLEKWIQRLKMAGFVKVPLSYNGRIEATNLLQRYSHKYKLKEENDCLLVCWSDRPLFSVSAWKFR* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4960 438 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 5 437 IPR005202 -
Mal2g4960 438 ProSiteProfiles GRAS family profile. 13 436 IPR005202 -
Mal2g4960 438 Pfam GRAS domain family 25 436 IPR005202 -
Mal2g4960 438 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 5 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4960 Mal-Chr2 114833358 114836458 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4960 1 438 GRAS Transcription Factor Family AT1G50420 49.666 9.45e-154 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal2g4960 GRAS 7.4e-116 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4960 - - gmx:100779726 734.561