LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g4955	ATGTCATCTTCATCATCATCATCATCCTACAATTTGATTTCTCAACAATGGATCTATGACGTGTTCATAAATTTCAGAGGGGAAGACACGCGCAAGAGCTTGGTTTCTCATCTATACGCTGCTCTCTCAAACGCGGGAATCAATACTTTTCTTGACGATGAAAAGCTTAAAAAGGGATGGGAAGTAGAACCAGAACTATTGCGAGCTATACAAGGGTCTCAAATATGTTTAGTTATTTTCTCCGAACACTACACAGAATCTAGTTGGTGTCTAGTTGAACTGGTGAAAATCATGGAACACCGCAAAACTAATAATAATGGTCCAGTGGTTATCCCCATATTTTACCATGTTGACCCATCTGTCGTTCGTCGTCAGGTGGGTGATTTTGGAAAAGCTTTGGAAGCTATTACCAAAAGAATTCACCCACCAAAAGAGAGGCAAGAACTTTTGCGGACATGGAAGCGTGCTCTCACTCAAGCTGCAAATATTTCCGGATGGGATTCTAGCATTTTCAGGAGTGAAAGTGAACTAGTGAATAAAATTGTTGATGAAGTTTTGAGAAAGCTGGAAAACACATTCTTGCCTACTACAGAATTCCCAGTTGGACTAGAGTCCCGTGTGGACCAAGTGATTCTGTCCATTGAAAATCAATCAAGCAAAGTTTCTATGGTAGGCATTTGGGGAATGGGCGGGTTGGGTAAAACTACCACAGCTAAAGGCATCTACAATAAAATTCATCGCAAATTTGTGCATAGAAGTTTCATCGAGAATATTAGACAAACTTGTGAAACAGATAAAGGGTATATTCGTTTACAACAACAACTTCTGTCAGATCTCTTCAAAACAAAGGAGAAGATACACAACATTGCATCAGGGACAATTACAATCAACAAACGACTCTCTGCAAAAAAGGTGCTCATTGTACTTGATGATGTGACCAAAGTACAGCAGGTAAAAGCCCTATGTGGAAATTATAAATGTTTAGGTTTGGGAAGTGTACTAATTGTTACAACCAGAGATGCACACGTACTTAAGTTACTTGAAGTTGATTGTGTCTGTACAGCGAAAGAAATGGACGAAAATGAGTCCCTTGAACTTTTCAGTTGGCATGCTTTTAGAAACGCGACTCCAAGAGCAAACTTCAGTGATCTCTCAAAAAATGTAGTTAATTACTGTGGAGGATTACCCCTGGCTGTTGAAGTCATCGGATCTTACTTATTTGAAAGGTCAAAAGAAGAATGGAAAAGTGTGCTATCGAAATTAGAAAAAATTCCCCTTGAAGAAGTGCAAGAGAAATTGAGAATAAGCTATGATGGTTTGACAGATGACACGAAAAAAGCTATATTTCTTGACGTATGTTGTTTCTTTATCGGCAAGGACAGAGACTATGTTACCGAGATACTAAATGGTTGTGGACTTTTTGCTGGTATCGGAATAGCTGTCCTCATAGAAAGGAGCCTTCTAAAAGTCGAGAAGAATAACAAGCTTGGAATGCATGATTTAATAAGAGACATGGGTAGAGAAATTGTTCGCGGAAGTTCAACAAACGATCCAGGGGAGCGTAGTAGGTTGTGGTTTCACGAGGATGCACATAGTGTTTTGACAAAGAATACGGGAACACAAAAAGTTGAGGGGTTGATTTTGAACTTGCAAAGAAAAGGTAGAGGTAGCTTCGATACCAATGTTTTCCAACAGATGCAGAACATGAGACTTTTGCAACTTGATTGTGTTGACCTCACTGGTGATTTTGGACATCTTTCCAAACAATTGAGATGGGTCAATTGGCAACGATCTACCTTCAACTGTATACCCAATGACTTTTATCAGGGAAATCTAGTTGTTTTAGAATTAAAATTTAGCAATGTTAAACAAGTTTGGAAGGATACCAAGTTGTTGGACAAGCTAAAAATACTCAATCTCAGTCATTCCAAGTACTTGAAAAGCACCCCTGACTTTTCAAAATTACCGAATCTAGAAAAGCTCATTATGAAGGATTGTCCAAGTTTGTCCGAGGTACACCCGTCCATTGGAGTTCTCAAGAATCTTCTTCTGATAAATTTGAAGGACTGTACAAGTCTTGGCAATCTGCCGAGGGAGATCTATCAGCTGATATCTGTGAAAACTCTCATCCTTTTTGGTTGTTCAAAGATTGACAAATTGGAAGAAGATATAGTGCAAATGAAATCCTTGACAACTCTAGTTGCAACAAATACTGGCGTCAAACAAGCACCCTTTTCCATAGTTCGATCAAAAAGCATTGTGTATATATCCCTATGTGGATATGAAGGATTATCACGTGATGTTTTTCCTTCTCTCATTTGGTCTTGGATGTCACCAACTATGAATTCCTTACCACATATTCCCCTCACTTCCTTGGATGTAGAGAGCAATAATTTGGTTTTGGATTATCAATCAACAATGCACAGTAGTTGTTCAGAACATAGAAGTGTTAGGGTAGAATGCCAATCGGTGATTCAACTAATTCAAAAATTAAAAAGTTTTCTTGATGGTCTATATGGTGCAAATCTTACTGAATCGGAAACATCGCATGCATCACAAATCTCGGATATTTCCTTGAAATCTCTTTTGATTACAATGGGAAGTTGCCACACAGTCGTTGATGCTCTTGGCAAGAGCTTATCACAGGGATTGACAACCAATGATTCTAGTGATTCTTTCCTTCCGGGTGACAATTATCCTTCTTGGTTAGCCTATACAAGTGAAGGACCTTCAGTACGATTTGAAGTGCCCGAGGATTGTGATGGTTGCTTGAAGGGAATAACTTTATACGTTGTTTATTCATCCACGCCTGAAAACATGGAAACTGAATGTCTGACTAGTGTTTTGATCATTAATTACACAAAATTCACGCTCCATATATACAAGCGAGACACCGTAATGTCCTTCAACGATGAAGATTGGCAGAGTGTAATATCAAATTTAGCAGTTGGGGACAATGTGGGGATTTTTGTAGCTTTTGGGCATGGGTTGACTGTTAAGAAGACAGTTGTCTATCTAACATATGGCGAGTCAAGTGCTATGCAAATTGAGCCATCAATTACTGTGGAAGTTAAAGTACAAATGGAGTCATTACCTGAACTGGAAGTGCAACCATCATTTAATGTGAAAAGGGAGCCGTCATCTGAAGATGAAGTGCAGCCATCACTTAATGTGAAGATGGAGCCATTACCAGAACTGGAATCATCATCTAATGTGAAAAGGGAGCCATCATCTGAAGATGAAGTGAAGCCATCACCTGATGTGAAGATGGTGCCACTACCTGAACTGGAAGTGCAACCATCATCTAATATGAAAAGGGAGCAAACACCTGAAGATGAAGTGCAGCCATCACTTGATGTGAAGATGGAGCCATCACCTATCATCAAGAATGAGTCATTACCCAAGAGAAATACAAAAATATTTGTAAGATTTTCAAAGAGAGTGGGAAAATGTTTATGCTTGAATGGGAATAGAGGTTTCAACAATTTTTAA	3492	0.3892	MSSSSSSSSYNLISQQWIYDVFINFRGEDTRKSLVSHLYAALSNAGINTFLDDEKLKKGWEVEPELLRAIQGSQICLVIFSEHYTESSWCLVELVKIMEHRKTNNNGPVVIPIFYHVDPSVVRRQVGDFGKALEAITKRIHPPKERQELLRTWKRALTQAANISGWDSSIFRSESELVNKIVDEVLRKLENTFLPTTEFPVGLESRVDQVILSIENQSSKVSMVGIWGMGGLGKTTTAKGIYNKIHRKFVHRSFIENIRQTCETDKGYIRLQQQLLSDLFKTKEKIHNIASGTITINKRLSAKKVLIVLDDVTKVQQVKALCGNYKCLGLGSVLIVTTRDAHVLKLLEVDCVCTAKEMDENESLELFSWHAFRNATPRANFSDLSKNVVNYCGGLPLAVEVIGSYLFERSKEEWKSVLSKLEKIPLEEVQEKLRISYDGLTDDTKKAIFLDVCCFFIGKDRDYVTEILNGCGLFAGIGIAVLIERSLLKVEKNNKLGMHDLIRDMGREIVRGSSTNDPGERSRLWFHEDAHSVLTKNTGTQKVEGLILNLQRKGRGSFDTNVFQQMQNMRLLQLDCVDLTGDFGHLSKQLRWVNWQRSTFNCIPNDFYQGNLVVLELKFSNVKQVWKDTKLLDKLKILNLSHSKYLKSTPDFSKLPNLEKLIMKDCPSLSEVHPSIGVLKNLLLINLKDCTSLGNLPREIYQLISVKTLILFGCSKIDKLEEDIVQMKSLTTLVATNTGVKQAPFSIVRSKSIVYISLCGYEGLSRDVFPSLIWSWMSPTMNSLPHIPLTSLDVESNNLVLDYQSTMHSSCSEHRSVRVECQSVIQLIQKLKSFLDGLYGANLTESETSHASQISDISLKSLLITMGSCHTVVDALGKSLSQGLTTNDSSDSFLPGDNYPSWLAYTSEGPSVRFEVPEDCDGCLKGITLYVVYSSTPENMETECLTSVLIINYTKFTLHIYKRDTVMSFNDEDWQSVISNLAVGDNVGIFVAFGHGLTVKKTVVYLTYGESSAMQIEPSITVEVKVQMESLPELEVQPSFNVKREPSSEDEVQPSLNVKMEPLPELESSSNVKREPSSEDEVKPSPDVKMVPLPELEVQPSSNMKREQTPEDEVQPSLDVKMEPSPIIKNESLPKRNTKIFVRFSKRVGKCLCLNGNRGFNNF*	1164

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g4955	1163	Gene3D	-	13	191	IPR035897	-
	Mal2g4955	1163	PRINTS	Disease resistance protein signature	392	406	-	-
	Mal2g4955	1163	PRINTS	Disease resistance protein signature	223	238	-	-
	Mal2g4955	1163	PRINTS	Disease resistance protein signature	299	313	-	-
	Mal2g4955	1163	PRINTS	Disease resistance protein signature	630	646	-	-
	Mal2g4955	1163	ProSiteProfiles	TIR domain profile.	17	189	IPR000157	GO:0007165
	Mal2g4955	1163	MobiDBLite	consensus disorder prediction	1037	1131	-	-
	Mal2g4955	1163	Gene3D	-	192	351	IPR027417	-
	Mal2g4955	1163	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	22	1009	-	-
	Mal2g4955	1163	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	22	1009	IPR044974	GO:0006952
	Mal2g4955	1163	Gene3D	-	357	441	IPR042197	-
	Mal2g4955	1163	SUPERFAMILY	L domain-like	498	800	-	-
	Mal2g4955	1163	MobiDBLite	consensus disorder prediction	1072	1086	-	-
	Mal2g4955	1163	Gene3D	Ribonuclease Inhibitor	549	874	IPR032675	-
	Mal2g4955	1163	SMART	till_3	18	163	IPR000157	GO:0007165
	Mal2g4955	1163	Pfam	TIR domain	19	193	IPR000157	GO:0007165
	Mal2g4955	1163	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	189	450	IPR027417	-
	Mal2g4955	1163	Pfam	NB-ARC domain	204	436	IPR002182	GO:0043531
	Mal2g4955	1163	SUPERFAMILY	Toll/Interleukin receptor TIR domain	9	166	IPR035897	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g4955	Mal-Chr2	114666230	114671491	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal2g4955	10	747	WRKY Transcription Factor Family	AT4G12020	29.961	2.65e-79	285

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g4955	-		-	mtr:MTR_8g011850	1277.31