Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4926 ATGGCAACAAAAGGAGCGATAAGGGTTGAAGTCGTTGATTCTCGATCATCTTCTGTTCTCGCTCGTGCCAAAGATGGCAGTGCTTTAGCTAAATGGTTCTGTAAGAAAGATGTTCTTGTTGCACTCATTGACATGCACAGTTGTAGCCTTGAAAAACTTAATTCGAAAGAACCAAATGTGAAAAGGGTGAAGGTTGGGAAAGGGAAAAAGGTTAAGGATCCTAATGCGCCGAAGCATCCTCCCACTCCTTTCTTTGTCTTTATGGACGATTTTAGAAAGACTTTTAAGGAAGCTAACCCTGATTCCAAGGATGTTAAAAGGGTTGGTAAGGAAGCTGGTGAGAAGTGGAGGTCTTTGACTGATGAAGAGAAGAAGCCTTATTTGGATAGAGTTGTTGAACTGAAGTATGTAACTCAAAAAAAAAAAGGGGAATCGGATCCAATTCACTGTAACTCAAAAAAGTCGAAATTGAATGCTTTTTTCTCATAG 489 0.3988 MATKGAIRVEVVDSRSSSVLARAKDGSALAKWFCKKDVLVALIDMHSCSLEKLNSKEPNVKRVKVGKGKKVKDPNAPKHPPTPFFVFMDDFRKTFKEANPDSKDVKRVGKEAGEKWRSLTDEEKKPYLDRVVELKYVTQKKKGESDPIHCNSKKSKLNAFFS* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4926 162 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 52 148 - -
Mal2g4926 162 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 11 52 - -
Mal2g4926 162 CDD HMGB-UBF_HMG-box 77 135 - -
Mal2g4926 162 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 52 148 - -
Mal2g4926 162 Gene3D High mobility group box domain 61 144 IPR036910 -
Mal2g4926 162 MobiDBLite consensus disorder prediction 61 82 - -
Mal2g4926 162 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 77 146 IPR009071 -
Mal2g4926 162 SUPERFAMILY HMG-box 63 136 IPR036910 -
Mal2g4926 162 MobiDBLite consensus disorder prediction 61 76 - -
Mal2g4926 162 Pfam HMG (high mobility group) box 77 141 IPR009071 -
Mal2g4926 162 MobiDBLite consensus disorder prediction 141 162 - -
Mal2g4926 162 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 11 52 - -
Mal2g4926 162 SMART hmgende2 76 147 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4926 Mal-Chr2 113849870 113851315 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mal2g4926 HMG_box 8.7e-16 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4926 K25507 - gmx:100306558 185.652