Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4923 ATGCATCCTTGGCTTGAAAGTATAGTTAATGTATGCAGGAACAGGAAGAATGACAACATGGCTGCATTCGACGATGACCCTCTTACGAGATCGATTAATCTTCAAAGGCATTACTATGGAGAATTTTCCAGTGCTGTTGTTCAAGCCAATACAGCTATGGAAGATCAAAGCCAAGTTGAAGTTGCCTCTAAAAATGCACTCTTTCTTGGTGTTTACGACGGCCATGGTGGCGTCGATGCTTCCCAGTTCCTCTGTGAACACCTCTTCAACAATCTACTGAGGCTTGCTAATGAGAATGAAAATAATATCACTCAAGCTACTTTGAGCAATGCTGTTTCTGCTACTGAAGATGGATTTTTGGATTTTGTGAAAACCAATTATATTGTCGAGCCAAATCTTGGAAAAGTTGGCTCATGCTGTCTTGCTGGAATTATATGGAAAGGGACGCTGCATGTTGCGAATCTTGGAGATTCGCGCGCTGTAATTGGTACTATGGTTAATAAAAAAATCCATGCTGAGCAGTTGACAAGAGATCACAATTCTAATGATCAAGCTATTAGAGAAGAACTCAAGTCAATGCATCTAGATGATCCTAACATTGTGATGGAAAAGAATGGAGCGTGGCGCGTTAAAGGCATCATTATGGTTAGTAGAAGTATTGGTGATGCATATTTGAAGAGGCCAGAATTTACTTTGTGCGAATCGTTCCCCAAATTTCGAAAAGTGCCTGAACCATTTACTAGAGGTGTGGTATCAGCAGAACCAGAGATGCGTTCTAGAGTTCTAACGGATCGTGATAAGTTTCTTATATTTGCTTCTGATGGACTTTGGGATTTAATGTCAAATGAAGATGCCGCTGAAATTGTACAAAAGAATCCAAGAAATGGAATAGCAAAAAGGCTTCTGAGTACTGCTCTAGCGAAAGAGGCTAGAAGAAGGGAAGTTACCTATAGGAACATGATTGCTGCTGATCCAGGGCGTGACAGCAGGAGGACTTTTCATGATGATATAAGTGTGATTGTTGTGTTCTTGGACAAAACGTCGTTTCTGAGGAAGCGCGTACGTAATTTGTCCTACAAAGGCTCATCTGACATTCCTACACCATCAGCATTTGCACGGTCTGGTTTAACCGCTCCAAGGCTGCAGTTTATGAACCCTCAAAGGCTGAAGGAGAGTATTAAAAGCCGGTTTAAATCAAGCCCATCGCAGGCATCGACCTCTCAGGCTCATTGCCCTCAAAGTCCTCGGACTCCTCTGGCTCAGAACCCTCAAACCCCTGAGGCTGAGGATTCTCAGGCTGTGAGCCTTTTGGGTCAGAGTTCTCGGGTAAAGAGCAGTTGGAGGAATGTTAAACTGCAGTTTTCACCGAAACGAACATAG 1380 0.429 MHPWLESIVNVCRNRKNDNMAAFDDDPLTRSINLQRHYYGEFSSAVVQANTAMEDQSQVEVASKNALFLGVYDGHGGVDASQFLCEHLFNNLLRLANENENNITQATLSNAVSATEDGFLDFVKTNYIVEPNLGKVGSCCLAGIIWKGTLHVANLGDSRAVIGTMVNKKIHAEQLTRDHNSNDQAIREELKSMHLDDPNIVMEKNGAWRVKGIIMVSRSIGDAYLKRPEFTLCESFPKFRKVPEPFTRGVVSAEPEMRSRVLTDRDKFLIFASDGLWDLMSNEDAAEIVQKNPRNGIAKRLLSTALAKEARRREVTYRNMIAADPGRDSRRTFHDDISVIVVFLDKTSFLRKRVRNLSYKGSSDIPTPSAFARSGLTAPRLQFMNPQRLKESIKSRFKSSPSQASTSQAHCPQSPRTPLAQNPQTPEAEDSQAVSLLGQSSRVKSSWRNVKLQFSPKRT* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4923 459 SUPERFAMILY PP2C-like 43 345 IPR036457 -
Mal2g4923 459 SMART PP2C_4 26 342 IPR001932 -
Mal2g4923 459 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 13 354 - -
Mal2g4923 459 MobiDBLite consensus disorder prediction 396 440 - -
Mal2g4923 459 PANTHER ALPHABET, ISOFORM E-RELATED 13 354 - -
Mal2g4923 459 ProSitePatterns PPM-type phosphatase domain signature. 68 76 IPR000222 GO:0043169
Mal2g4923 459 ProSiteProfiles PPM-type phosphatase domain profile. 38 344 IPR001932 -
Mal2g4923 459 CDD PP2Cc 39 344 IPR001932 -
Mal2g4923 459 Pfam Protein phosphatase 2C 61 315 IPR001932 -
Mal2g4923 459 MobiDBLite consensus disorder prediction 391 440 - -
Mal2g4923 459 Gene3D - 19 352 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4923 Mal-Chr2 113588250 113590005 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4923 28 372 PP2C-type Phosphatase Gene Family AT5G06750 51.420 3.47e-118 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4923 K01102 - csv:101222146 368.622