Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4881 ATGATGGTGAGACCTCCTTGCTGTGACAAAATTGGGGTTAAGAAAGGACCTTGGACTCCAGAGGAGGATATAATTTTGGTCTCTTACATTCAAGAACAAGGACCTGGTAATTGGAGATCTGTTCCCACCATTACAGGTTTGATGAGATGCAGCAAAAGTTGCAGACTAAGATGGACCAATTATCTACGACCAGGTATCAAAAGAGGTAATTTCACTGATCATGAAGAAAAAATGATAATACACCTTCAAGCGCTTTTGGGAAATAGATGGGCTGCCATAGCTTCCTATCTTCCACAAAGAACAGACAATGACATAAAAAACTATTGGAATACACATTTGAGGAAAAAGCTAAAGAAGATTAATCAAACAGGCAATAATAATGAAAAAGAAGAAAACTCTACTCCACAGGTAAAAGGTCAATGGGAGAGAAGGCTTCAAACAGATATCCATATGGCAAAACAAGCTTTGTGTGAAGCACTTTGTCTTGATAATCCAACACCTATTTTAACTGAAAACCAAACACCCCCTTATGCATCAAACACTGAAAACATAGCTAGATTACTCGAAAAGTGGATGAAAAAACCCGAAAACTCCCATGAGAAAAAAATTTTAGGAAACTCCTTCATGGTAGAAACAGGAACCAGTTCTATAGCATGCACACAAAAAGATCAAGCATTTGACTCTTCGTTGAGTTTTAACTCCTTAAATTCTGATTGTTCTCAATCTTGCTTTTTTCAATATGAAAGTAAACCAAACCAGGGAACTCAAGTCCCTCTCATGTTTATGGAGAATTGGCTTTTTGATGATGGGGACGCTCAGTGCAATGAAGATCTAATGAACGTTTCATTGGAGGAAAATACAGCAGGGTTGTTTTAG 876 0.3767 MMVRPPCCDKIGVKKGPWTPEEDIILVSYIQEQGPGNWRSVPTITGLMRCSKSCRLRWTNYLRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLRKKLKKINQTGNNNEKEENSTPQVKGQWERRLQTDIHMAKQALCEALCLDNPTPILTENQTPPYASNTENIARLLEKWMKKPENSHEKKILGNSFMVETGTSSIACTQKDQAFDSSLSFNSLNSDCSQSCFFQYESKPNQGTQVPLMFMENWLFDDGDAQCNEDLMNVSLEENTAGLF* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4881 291 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Mal2g4881 291 Gene3D - 14 67 - -
Mal2g4881 291 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Mal2g4881 291 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Mal2g4881 291 MobiDBLite consensus disorder prediction 120 139 - -
Mal2g4881 291 SMART sant 14 64 IPR001005 -
Mal2g4881 291 SMART sant 67 115 IPR001005 -
Mal2g4881 291 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Mal2g4881 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mal2g4881 291 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mal2g4881 291 PANTHER - 2 278 - -
Mal2g4881 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Mal2g4881 291 CDD SANT 70 113 IPR001005 -
Mal2g4881 291 Gene3D - 69 145 - -
Mal2g4881 291 CDD SANT 17 62 IPR001005 -
Mal2g4881 291 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4881 Mal-Chr2 110863804 110865518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4881 2 269 MYB Transcription Factor Family AT5G62470 51.929 1.98e-103 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal2g4881 Myb_DNA-binding 6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4881 K09422 - gmx:100807020 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g4881 2 110863804 110865518 Mal2g4881 2 110863804 110865518 ECH