Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4869 ATGTCTCTCTACCAAGCTCCTGGATTCCGATTCCACCCTACTGATGAAGAGATCGTTTGTTTCTATCTGAAGCGCAAACTCAATGGAAAGTTACCACCCTGTTTTGATCATCTTGCTGTCATCGACATCTACAAGTTCGAACCGTGGGATCTTCCCAATATGTCCAAGCTGAAGACTAAGGATTTGGAATGGTACTTCTTCAGTGGGCTGGACAAGAAGTACGGCACTGGATGCAGGACGAATCGTGCTACTGATCGAGGTTACTGGAAGACTACTGGCAAGGACCGGGCTATAAAAAACGGGGAGGAGACGGTTGGAATGAAGAAGACCCTTGTTTATCACCTGGGTCGGGCTCCACATGGTAACCGGAGCAATTGGGTCATGCATGAGTATAGGATGATTGATGAAGAATTGGCCAAAGCTGGAGTGCAGGATGCTTATGTGCTGTGTAGGATCTTCGAGAAGAGTGGTTCGGGGCCGAAGAATGGGGAGAAGTATGGGGCTCCCTTTGTAGAGGCAGAATGGCAGAATGTTGATGAACCAGTGGATCCCTTGCCACCGGTTGATAATCAGCTTTTGGAACAACGAGTGGCTGCTCCTGCTCCTGATTATGCTGAATGGTTGCAATCCTTGGTGGCTATTGATAACGATCTTTTGAAAGAAAGCTTGCCTGCTCCTACTGATGATAATTATCTTGAAATCCTTGACCTTGACCAGGAGCTTGATACTAGTGTTACAGTTGGAAATGCTGATTTGCCATCAAACTTCTATTATGGGGAGTGTAGTAGCCATCCTCAGCATTCCCAGTTGGAAGCCGCTTTTGGTACTTATGATCATCAAGTTGATCTATATGGTGCGGATTCAGTGCAAGATGGTTACAATGGTGAGACAAACCATAACGAAAATCCTCTGAACTTCAATTTTGCCTCTGAGGATCCAGATCTATATTTTGATATGGATGAATATCTTATGGGTTCGAATGAAGAATATGTTGAAACCAATGATCTTAAGAATCTTGACGTGGTTAATTCCACCGTTATAGATCCTTCTTTTGCTGCAATGCTAGATGATGAGTACCTTGATTGCCCTGATGAAGATATTACCAAATGTATATGCTTTGATTGTGACAGCCCCATTGCCAACCATGGGCAGTCTATCATTGAACAGAATGCGGAGGGCAAAACCAATGGCCGTTCCTTGGCAAACAAACATGTTTTTGAAGCACAGTTTAGTAATGAAGTTTTGCCTAAGGGGGATCAAGGGGCTGCATCAAATTGGGTCTCCGGAGGTGAAAATGCTTATGTAAAGCAAGCCAATAAATTGTTGGCCAACATACCAGCTCCTCCTGCATTTGCATCAGAGTTTCCTACTAAGGAGTTTGCTATTGGGATACATCCTGCTGCCGAGTCTTCCAATTCAGCTCATATAACTACGGGTATGATCAGCATTACAGACATCTCTTACAGAGGCAATGCGATAGATTGGATGGCGGGCAAGAATGGAGGTATTAACACCATAATCTCTACTGGATTTACCCAAACTGCTGCTACTGGCTTGGTCTGTAAGAAAACTGCATTTATGTTATCACATGGTTGGGTTTACTTGATGGGTTTCTCCGTTATGATTCTTTCACTGAGTTTGAAGATCGGAAGCTTCATGTATATGGGTAAATGA 1674 0.4391 MSLYQAPGFRFHPTDEEIVCFYLKRKLNGKLPPCFDHLAVIDIYKFEPWDLPNMSKLKTKDLEWYFFSGLDKKYGTGCRTNRATDRGYWKTTGKDRAIKNGEETVGMKKTLVYHLGRAPHGNRSNWVMHEYRMIDEELAKAGVQDAYVLCRIFEKSGSGPKNGEKYGAPFVEAEWQNVDEPVDPLPPVDNQLLEQRVAAPAPDYAEWLQSLVAIDNDLLKESLPAPTDDNYLEILDLDQELDTSVTVGNADLPSNFYYGECSSHPQHSQLEAAFGTYDHQVDLYGADSVQDGYNGETNHNENPLNFNFASEDPDLYFDMDEYLMGSNEEYVETNDLKNLDVVNSTVIDPSFAAMLDDEYLDCPDEDITKCICFDCDSPIANHGQSIIEQNAEGKTNGRSLANKHVFEAQFSNEVLPKGDQGAASNWVSGGENAYVKQANKLLANIPAPPAFASEFPTKEFAIGIHPAAESSNSAHITTGMISITDISYRGNAIDWMAGKNGGINTIISTGFTQTAATGLVCKKTAFMLSHGWVYLMGFSVMILSLSLKIGSFMYMGK* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4869 557 SUPERFAMILY NAC domain 4 155 IPR036093 GO:0003677|GO:0006355
Mal2g4869 557 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Mal2g4869 557 Gene3D NAC domain 14 158 IPR036093 GO:0003677|GO:0006355
Mal2g4869 557 PANTHER NAC DOMAIN-CONTAINING PROTEIN 53-LIKE 227 552 - -
Mal2g4869 557 PANTHER NAC DOMAIN-CONTAINING PROTEIN 53-LIKE 6 177 - -
Mal2g4869 557 ProSiteProfiles NAC domain profile. 5 155 IPR003441 GO:0003677|GO:0006355
Mal2g4869 557 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 177 - -
Mal2g4869 557 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 227 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4869 Mal-Chr2 110380362 110384660 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4869 293 549 NAC Transcription Factor Family AT5G04410 26.538 1.85e-15 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal2g4869 NAM 8.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4869 - - mtr:MTR_0036s0150 946.036