Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4860 ATGGATTGCTACAACGTTCTGAAAGTGCACCGATATGCAAGCGAAGATGATTTAAGAAAAGCCTATAAAAGGCTTTCTTTAGTACATCATCCAGACAAACACCCCCCTGAAAAAAGAATCGAAGCTGAAAACAGATTCATTCTTGTTTCTCAAGCTTATGACATTCTCAGCGACCCAGTAAAGCGGAAGATCTATGACCAATACGGCGAAGAAGGCCTTCAGTACGGTGGTGCCGCTCCTCCATGGAGTCAGAGGCAGTCTTCTTCTTCTTCTTCTTCTTCTTCGGCGTATAAGTATAATCCTCGCTCTGCTGAGGATATTTATAATGACTTCTTTCGTCGTGAGAATGTTTCCAAAGCTGCGAAGAAGGATGATCCTATTGAGACAACATTGTTTTGCACTCTCGAAGAATTGTACAATGGGGCAAATAAAAGGGTAAAGATTACCAGAACCGTAATTAATCCTGCTGGGAATAGTAATATTGAGGAGGAGGTGTTGACTATTAATGTAAAAGCTGGATGGAAAAAAGGGACAAAGGTTACCTTCAATGAGAAGGGTGACCAGAAGCCTGGCATCATCTCAGCTGATATTATTTTTGTGATTGACGAAAAACCACACACTCGTTATACTAGGAATGGAAATGATCTTGTGATTACCCAAAAGATAAGTCTGGTGGATGCTCTCACAAATAAAACATTGGAAATCCCTGCTTTGGATGGAAGGAGTCTTTTGGTCCAGTTGCCAAGTGTAGTCACACCTGACTATGAGCACAAAGTACCCAATGAAGGGATGCCAATAACCAAACAGCCAGGAAGGAAGGGGACTTTAAAAATTAAGTTTGACATCAAGTATCCCTTAAGGTTAACTCCTCAGCAAAAGTCTGGTCTGAGGAGTGTCTTACGTTGA 906 0.415 MDCYNVLKVHRYASEDDLRKAYKRLSLVHHPDKHPPEKRIEAENRFILVSQAYDILSDPVKRKIYDQYGEEGLQYGGAAPPWSQRQSSSSSSSSSAYKYNPRSAEDIYNDFFRRENVSKAAKKDDPIETTLFCTLEELYNGANKRVKITRTVINPAGNSNIEEEVLTINVKAGWKKGTKVTFNEKGDQKPGIISADIIFVIDEKPHTRYTRNGNDLVITQKISLVDALTNKTLEIPALDGRSLLVQLPSVVTPDYEHKVPNEGMPITKQPGRKGTLKIKFDIKYPLRLTPQQKSGLRSVLR* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4860 301 CDD DnaJ_C 125 285 - -
Mal2g4860 301 SUPERFAMILY HSP40/DnaJ peptide-binding domain 209 294 IPR008971 GO:0006457|GO:0051082
Mal2g4860 301 Gene3D - 124 205 - -
Mal2g4860 301 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 300 - -
Mal2g4860 301 ProSitePatterns Nt-dnaJ domain signature. 46 65 IPR018253 -
Mal2g4860 301 SUPERFAMILY HSP40/DnaJ peptide-binding domain 125 206 IPR008971 GO:0006457|GO:0051082
Mal2g4860 301 Gene3D DnaJ domain 1 123 IPR036869 -
Mal2g4860 301 PANTHER HEAT-SHOCK PROTEIN DNAJ 2 300 - -
Mal2g4860 301 MobiDBLite consensus disorder prediction 80 99 - -
Mal2g4860 301 ProSiteProfiles dnaJ domain profile. 2 69 IPR001623 -
Mal2g4860 301 SMART dnaj_3 1 61 IPR001623 -
Mal2g4860 301 SUPERFAMILY Chaperone J-domain 1 84 IPR036869 -
Mal2g4860 301 Gene3D - 206 285 - -
Mal2g4860 301 CDD DnaJ 2 58 IPR001623 -
Mal2g4860 301 MobiDBLite consensus disorder prediction 76 99 - -
Mal2g4860 301 PRINTS DnaJ domain signature 22 37 IPR001623 -
Mal2g4860 301 PRINTS DnaJ domain signature 4 22 IPR001623 -
Mal2g4860 301 PRINTS DnaJ domain signature 41 61 IPR001623 -
Mal2g4860 301 PRINTS DnaJ domain signature 61 80 IPR001623 -
Mal2g4860 301 Pfam DnaJ domain 2 66 IPR001623 -
Mal2g4860 301 Pfam DnaJ C terminal domain 127 285 IPR002939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4860 Mal-Chr2 109886669 109895666 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4860 4 68 C2H2 Transcription Factor Family AT1G74250 38.235 2.71e-07 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g4860 2 109886669 109895666 Mal2g4860 2 109886669 109895666 ECH