Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4771 ATGGCGTCTTCTTCAGACTCATGGGTGAAGGAATATAATGAAGCAATGAAGCTTGCTGATGATATTAGTGGCATGATTTCTGAACATAATTCATTTCCTTCATCTGGACCAGAAACACAGCGTCATGCATCTGCTATAAGAAGGAAGATCACAATATTGGGGACCAGATTGGATAGCTTGCAATCCCTTTTGTCAAAGCTCCCTGTAAAGTCTGAGAAAGAGATGAATCGTCGCAAGGACAACCTTGCAAATTTGAGGTCAAAGGTTAACCAAATGGCTTCTACATTGAACATGTCCAACTTTGCAAATAGGGATAGTTTGCTCGGGCCAGAAATTAAACCAGATGCAATGAGCAGAACTGTTGGCTTGGATAACAATGGACTTGTTGGTCTGCAACGACAAGTTATGAAAGAGCAAGATGAGGGCCTTGAGAAATTGGAGGAAACTGTATTAAGTACAAAACATATTGCGTTGGCAGTGAATGAAGAGCTGACTCTACACACTAGACTCATTGATGACTTGGACGAACATGTAGATGTTACAGATTCTCGGCTGAGGAGAGTGCAGAAGAACTTGGCTATTTTAAACAAACGTACCAAGGGTGGTTGCTCATGCTTGTGCATGCTATTAGCAGTGATTGGTATAGTGGGTTTGGTTCTTGTCATATGGCTTCTGGTCAAATATTTGTAG 690 0.4145 MASSSDSWVKEYNEAMKLADDISGMISEHNSFPSSGPETQRHASAIRRKITILGTRLDSLQSLLSKLPVKSEKEMNRRKDNLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPDAMSRTVGLDNNGLVGLQRQVMKEQDEGLEKLEETVLSTKHIALAVNEELTLHTRLIDDLDEHVDVTDSRLRRVQKNLAILNKRTKGGCSCLCMLLAVIGIVGLVLVIWLLVKYL* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4771 229 SMART tSNARE_6 128 195 IPR000727 -
Mal2g4771 229 SUPERFAMILY SNARE fusion complex 124 194 - -
Mal2g4771 229 CDD SNARE_Qc 136 193 - -
Mal2g4771 229 Pfam SNARE domain 170 221 IPR000727 -
Mal2g4771 229 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 224 - -
Mal2g4771 229 PANTHER SYNTAXIN 1 224 IPR045242 -
Mal2g4771 229 Gene3D - 134 197 - -
Mal2g4771 229 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 133 195 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4771 Mal-Chr2 104795159 104796866 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4771 1 229 SNARE and Associated Proteins AT1G79590 74.249 3.30e-123 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4771 K08503 - gmx:100794038 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g4771 2 104795159 104796866 Mal8g0374 8 5216513 5219675 PCT