Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4754 ATGTCGCTTGATTCGGCGTCAACAACTTCCTTAGATGATTTCACGTCTGATCAATATGAGGCTCTTTTGGCAGCCACCAAATCACCATTATGCCAGTTTGTTATGTGGAAGAACTTTGTCTCAAACTTACCAGCGGCTGTGAATGTCACTAAGGATGATATTTGCTCTATTTGTATGGAAGGCTTTGAAGAATCACACAATATCGAAGGAGGAAAAGGAAACAAACAAATTCCTTGTGGTCATGTGTATCACTCAAACTGTATCACTCAATGGCTCTGTCGCTGCAACTCTTGCCCTCTTTGCCGCCACCATATCTCCCATATGCATTTATATATTTGA 339 0.413 MSLDSASTTSLDDFTSDQYEALLAATKSPLCQFVMWKNFVSNLPAAVNVTKDDICSICMEGFEESHNIEGGKGNKQIPCGHVYHSNCITQWLCRCNSCPLCRHHISHMHLYI* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4754 112 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 110 IPR013083 -
Mal2g4754 112 SMART ring_2 55 101 IPR001841 -
Mal2g4754 112 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE 17 106 - -
Mal2g4754 112 SUPERFAMILY RING/U-box 36 107 - -
Mal2g4754 112 ProSiteProfiles Zinc finger RING-type profile. 55 102 IPR001841 -
Mal2g4754 112 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 17 106 - -
Mal2g4754 112 Pfam Ring finger domain 54 102 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4754 Mal-Chr2 104571987 104572325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4754 2 106 C3H Transcription Factor Family AT1G04790 32.407 7.74e-13 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4754 K22378 - gmx:102669154 117.857