Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4709 ATGAGGAAACCTGATTTGATCATGGGAAAAGACAGCAACAACAATGTTAACAAGAGCAAGCTAAGGAAAGGGTTATGGTCACCTGAGGAAGATGAGAAACTAGTAAGGTACATGATAACTAAAGGACAAGGTTGTTGGAGTGACATTGCGAGGAATGCTGGTCTTCAAAGGTGTGGCAAAAGTTGTCGTCTTCGTTGGATTAATTACTTGAGACCCGATCTTAAGCGCGGCGCGTTTTCACCGCAAGAGGAAGAACTCATCATTCACTTCCACTCCATTCTTGGAAACAGATGGTCTCAGATTGCAGCACGTCTCCCTGGTCGCACCGATAATGAAATTAAGAATTTTTGGAATTCCACATTGAAGAAGAGATTGAAAACCAACAACTCCACTCCATCACCAAACAATAGTGACTCATCAGATCAACCAATAGATCATGCTTTTGATGTGAAAAATAATATTACCATGCCAATTAATGAACAAGAACTCATGACATTGTGCATGGATTCCACATCATCAACTTCATCATCATCCATGCAATCCATGCAGATGCATGCCATGTTTGATCCATTTTCATTGTTGTCTAATAATCGTTATGACATGACCACAAGTTTCCATGCTCATGACATGCCAACATGCTTGGTTGATGATATTGGCCTTAATAGTGATGATTATGGGATTTTAGAGGCTAATAAAATGGGGTTATTAGAAAATGATTTTGAACTTCCTCCACTAGAAAGTAGAATTAGCATTGAAGACAAGAGTACCCTAATTGATGATTATAATGTGAAAAGCCATTACAACCACTTCAATAATAGTTGCGTCAATAACACTAATCAGATTCAAGACTCCAATGTAGAGGACTTGTTTGGATTTGGACATCATGGGCAAGGGCAAAACTTAAGAGTGGGAGAATGGGATTTGGAGGGTTTGATGCAAGACATATCCTATTTTCCTCCCCTTGATTTCCAAGTTTAA 978 0.3906 MRKPDLIMGKDSNNNVNKSKLRKGLWSPEEDEKLVRYMITKGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHFHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRLKTNNSTPSPNNSDSSDQPIDHAFDVKNNITMPINEQELMTLCMDSTSSTSSSSMQSMQMHAMFDPFSLLSNNRYDMTTSFHAHDMPTCLVDDIGLNSDDYGILEANKMGLLENDFELPPLESRISIEDKSTLIDDYNVKSHYNHFNNSCVNNTNQIQDSNVEDLFGFGHHGQGQNLRVGEWDLEGLMQDISYFPPLDFQV* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4709 325 CDD SANT 26 70 IPR001005 -
Mal2g4709 325 SUPERFAMILY Homeodomain-like 21 117 IPR009057 -
Mal2g4709 325 PANTHER MYB DOMAIN PROTEIN 55 1 325 - -
Mal2g4709 325 MobiDBLite consensus disorder prediction 124 145 - -
Mal2g4709 325 Gene3D - 78 146 - -
Mal2g4709 325 MobiDBLite consensus disorder prediction 124 143 - -
Mal2g4709 325 Pfam Myb-like DNA-binding domain 76 120 IPR001005 -
Mal2g4709 325 Pfam Myb-like DNA-binding domain 23 70 IPR001005 -
Mal2g4709 325 ProSiteProfiles Myb-like domain profile. 71 121 IPR001005 -
Mal2g4709 325 ProSiteProfiles Myb-like domain profile. 18 70 IPR001005 -
Mal2g4709 325 PANTHER TRANSCRIPTION FACTOR MYB83 1 325 - -
Mal2g4709 325 Gene3D - 23 75 - -
Mal2g4709 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 70 IPR017930 -
Mal2g4709 325 CDD SANT 78 121 IPR001005 -
Mal2g4709 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 125 IPR017930 -
Mal2g4709 325 SMART sant 75 123 IPR001005 -
Mal2g4709 325 SMART sant 22 72 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4709 Mal-Chr2 102332251 102335188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4709 1 325 MYB Transcription Factor Family AT3G08500 44.915 2.03e-81 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal2g4709 Myb_DNA-binding 6.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4709 K09422 - gmx:100813660 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g4709 2 102332251 102335188 Mal2g4709 2 102332251 102335188 ECH