Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4694 ATGGCAGCAGTGCCAGGAATTTCCGCAACCTTGCTCTCTCGCTCAAAACCCCACACTTCTCTTTTTCAACGCCTCTTCCTTCGTAGAAAGACTTCTAAAATTTTCGTTAAAGGTTTAGCATTTTCTACTACAGAGGAGAAATTAGCTGAAGCTTTTTCTCAATACGGAAATGTTCTCAAAGCTGATATAGTATTGAATAAAGCCAAGAATAAATCCAAAGGATTTGGATATGTGACTTTTGCTGAGGACGAAGAAGCCCGCAAGGCACAAATTGACATGAATGGAAAGATATTACACGGACGTGTCTTATATGTGGACATGGAACCACCTAACAAGCAAAAGAAAACATAG 351 0.396 MAAVPGISATLLSRSKPHTSLFQRLFLRRKTSKIFVKGLAFSTTEEKLAEAFSQYGNVLKADIVLNKAKNKSKGFGYVTFAEDEEARKAQIDMNGKILHGRVLYVDMEPPNKQKKT* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4694 116 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 34 103 IPR000504 GO:0003723
Mal2g4694 116 SMART rrm1_1 33 106 IPR000504 GO:0003723
Mal2g4694 116 PANTHER RNA RECOGNITION MOTIF 10 111 - -
Mal2g4694 116 SUPERFAMILY RNA-binding domain, RBD 29 112 IPR035979 GO:0003676
Mal2g4694 116 Gene3D - 13 116 IPR012677 -
Mal2g4694 116 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 110 IPR000504 GO:0003723
Mal2g4694 116 PANTHER TRANSFORMER-2-RELATED 10 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4694 Mal-Chr2 101664525 101673378 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4694 26 105 Eukaryotic Initiation Factors Gene Family AT1G22760 38.750 3.51e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4694 K13195 - gmx:100527061 157.918