Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4635 ATGGAGGAATACCATTGCAGGGCACGCCCAAACATGCCTTCCACCTTTGACACAACTAATATTTCATCGGATCCCCGTGATAAGTACTTCAAGATAGAGTTTGATTACACAGATATATGGGTTCCAACTAATACAAATCATCAATCTTTTGGAGACATTCGACGTTACACCCTTCATAATCTTTCAATAGATAAATTGATGCAACAAACTACAATTACATTGTGGCTTTCTCATATGAATGTTCCTAAAGATGCTTTTATGCTGGTGGTAGAAGAAATCTTGCGATGTGCTCGCGATATGGTTAATGGGACTTATAAGAACCTAAGGCTTCTTTGTATTCGAGTTGATTTTTCTCTTACAATGGCTTTTGAAGAAGATAGTTGTGATGAAGGTGATTATGAAGATGAAGAGAATCATTGTTTGGAAGAGGGTGAAGAGGAAATTGAGGTTGAAGAGGAAGATAATGGGTTGGTTCCTCCTATTACAAGGGCTATTGAAACTGGAAGTTATGAAGATGATTATCGATTTAATTATGAAGATGATTATGGATATAGAGGGAACAATAGTTTGGAAGAATATGAAGACGAAATGGAAGTTGAAGAAGAAGATAATGGGTTGGTTCCTCCTATTACAAGGGCTATTGAAAGTGAAGGTTATGAAGATGATTATGAAGTTGATTATGAAGATGATTATGGATATGGATGGAACAACAGTTTGGAAGAAGATGAAGAGGAAATGGAAGTTGAAGAAGAAGAGGATAATCGGTTCGTTCCTGCAGCTAAGTCGTGTATTGAGGGATTGGAGATGGTAAAAGTTGAAGAAGTAGAAAAATGTGCTATTTGTTTTGAAGATTTTAATGTTGGTGTTAGAATGCCATGTTCGCACATGTTTCATATGACTTGTATTTGTAATTGGTTGGTGATAGGAAATTCTTGCCCTTTATGTAGGTTTCAATTGCCTACTAGCAACATGAGTGAATAA 981 0.3629 MEEYHCRARPNMPSTFDTTNISSDPRDKYFKIEFDYTDIWVPTNTNHQSFGDIRRYTLHNLSIDKLMQQTTITLWLSHMNVPKDAFMLVVEEILRCARDMVNGTYKNLRLLCIRVDFSLTMAFEEDSCDEGDYEDEENHCLEEGEEEIEVEEEDNGLVPPITRAIETGSYEDDYRFNYEDDYGYRGNNSLEEYEDEMEVEEEDNGLVPPITRAIESEGYEDDYEVDYEDDYGYGWNNSLEEDEEEMEVEEEEDNRFVPAAKSCIEGLEMVKVEEVEKCAICFEDFNVGVRMPCSHMFHMTCICNWLVIGNSCPLCRFQLPTSNMSE* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4635 326 Pfam Ring finger domain 277 316 IPR001841 -
Mal2g4635 326 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 124 321 - -
Mal2g4635 326 ProSiteProfiles Zinc finger RING-type profile. 278 316 IPR001841 -
Mal2g4635 326 PANTHER F6A14.12 PROTEIN-RELATED 124 321 - -
Mal2g4635 326 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 259 325 IPR013083 -
Mal2g4635 326 SUPERFAMILY RING/U-box 277 321 - -
Mal2g4635 326 SMART ring_2 278 315 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4635 Mal-Chr2 99317645 99318625 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4635 258 324 C3H Transcription Factor Family AT3G02340 46.053 9.67e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4635 - K11982 mtr:MTR_3g031000 395.971