Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4634 ATGGAGGATGAAGAATACCATTGCAAGGCAAGCCCAAATATGTCTTCCACCGTTGACACAAATAATATTTCATCGGATCCCCATGACAAATACTTCAAGATTGAGTTTGATTACAGAGATATATGGGTTCCAACTAATACAAATCATCAATCTTTTGGAGACATTCGACGATACAGCCTTCATAATCTTTCAATAGATAAATTGATGCAACAAACTACAATTACATCGTGGCTTTCTCATATGAATGTTCCTAAAGATGCTTTTAGGTTGGTAGTAGAAGAAATCTTGCGATGTGCTCGCGATAGGGTTAACGTGACTTATAAGAACCTAAGGTTACTTTGTATTCGAGTTAATTTTTCTCTTACAATGGCTTTTGAAGAAGATAGTTGTGATGAAGGTGATTATGAAGATGAAGAGAATCATTGTTTGGAAGAGGATGAAGAAGAATTTGAGGTTGAAGAGGAAGATAATGGGTTGGTTCCTCCTCTTACAAGGGCTATTGAAAGTGAAAGTTATGAAGATGATTATCGAGTTAATTATGAAGATGATTATGGATATGGAGGGAACAATAGTTTGGAAGAATATGAAGACGAAATGGAAGTTGAAGAAGAAGATAATGGGTTGGTTCCTCCTATTACAAGGGCTATTGAAAGTGAAGGTTATGAAGATGATTATGAAGTTGATTATGAAGATGATTATGGATATGGATGGAACAACAGTTTGGAAGAAGATGAAGAGGAAATGGAAGTTGAAGAAGAAGAGGATAATCGGTTCGTTCCTGCGGCTAAGTCGTGTATTGAGGGATTGGAGATGGTAAAAGCTGAAGAAGTAGAAAAATGTGCTATTTGTTTTGAAGATTTTAATGTTGGTGTTACAATACCATGTTCGCACATGTTTCATATGACTTGTATTCGTGATTGGTTGGTGATAGGAAATTCTTGCCCTTTATGTAGGTTTCAGTTGCCTACTAGCAACATGAGTGAATAA 987 0.3607 MEDEEYHCKASPNMSSTVDTNNISSDPHDKYFKIEFDYRDIWVPTNTNHQSFGDIRRYSLHNLSIDKLMQQTTITSWLSHMNVPKDAFRLVVEEILRCARDRVNVTYKNLRLLCIRVNFSLTMAFEEDSCDEGDYEDEENHCLEEDEEEFEVEEEDNGLVPPLTRAIESESYEDDYRVNYEDDYGYGGNNSLEEYEDEMEVEEEDNGLVPPITRAIESEGYEDDYEVDYEDDYGYGWNNSLEEDEEEMEVEEEEDNRFVPAAKSCIEGLEMVKAEEVEKCAICFEDFNVGVTIPCSHMFHMTCIRDWLVIGNSCPLCRFQLPTSNMSE* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4634 328 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 261 327 IPR013083 -
Mal2g4634 328 SMART ring_2 280 317 IPR001841 -
Mal2g4634 328 ProSiteProfiles Zinc finger RING-type profile. 280 318 IPR001841 -
Mal2g4634 328 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 126 323 - -
Mal2g4634 328 SUPERFAMILY RING/U-box 279 323 - -
Mal2g4634 328 MobiDBLite consensus disorder prediction 1 22 - -
Mal2g4634 328 Pfam Ring finger domain 279 318 IPR001841 -
Mal2g4634 328 PANTHER F6A14.12 PROTEIN-RELATED 126 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4634 Mal-Chr2 99248413 99249399 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4634 228 323 C3H Transcription Factor Family AT5G01980 37.736 1.13e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4634 - K11982 mtr:MTR_3g031000 382.489