Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4605 ATGGCTTCAAGTTCATCTTCTCATTCCTTTTTTACCACTTGTGTATTATTCCTCTTTTTTCTATATTTGTCTTGTTTCTTCAACAACCTTGATGCAAAACACAGCATAATCAACACTCACAAACACCAACACAGGCACAACCACATCCATAATCCAAGACTCTATCGCGCATTTCTTGCACTGCAAGCATGGAAGCATGTGATCTACTCAGACCCAAAAAACATCACTTCAAATTGGGTAGGTCCTTCAGTTTGCAACTACACAGGTATCTACTGTGCTCCATCTCTTGATGATCCCAAAATAACAGTTGTCGCCGGCATTGACCTTAACCACGCAGACATAGCCGGATTCCTCCCCGAAGAATTAGCCTTCCTATCTGACCTTTCACTTCTCCACCTCAATAGCAACCGTTTCTGTGGCATCATTCCGAAAACCTTCACCAACCTAACTCATCTCTATGAGCTTGACCTTAGCAACAACAGATTCGTCGGACCTTTTCCTTCAGTCGTGCTTTCCCTTCCTTCCCTTGCCTATCTCGACCTTCGTTACAATGAATTTGAAGGTCCATTGCCTCCTGAGCTATTCAACAAACCTTTTGATGCTTTTTTCCTTAACAACAATCGCTTCACTAGTTCCATTCCAAGAAACTTAGGAAAAAGCAAAGCTTCTGTCATGGTTTTTGCTAATAACAAATTTGGAGGATGTTTACCAGAAAGCATAGTAAATTTCGCAGACACTTTGGAAGAACTTCTCTTAATCAACACAAGCATATCAGGTTGTCTTCCACAACAAGTTGGATTTCTATACAAATTGAGAGTGTTGGATGTGAGCTTCAACAACATTGTTGGTCCTATACCTTATAGTCTTGCAGGGTTATCTCATTTGGAGCAGTTAAATTTAGGACATAATATGATGAGTGGAATAGTCCCTATGGGAGTTTGTGAGTTACCAAACTTGGTTAATTTCACTTTTTCTTACAACTTCTTTTGTGAGGAAGAGGGCATTTGTAAGAATTTGACATCAAAGAAGATAGTCTTTGATGATCGCCGCAATTGCTTACCGGAAAAGCCACTCCAGAGAAGCGAAAAGGAATGTAGTCATAAACTTGAACACCCTGTTGATTGCTTTGAGCTTTGTTGTGTTCAAGGTGGTCTTGGGAATAATAATGTTAGTGCTGGTTCTATGGCTATTCCACCTTCTGCAATTCCACCAGCAGCATTGCCTGCACCTCTTGTTGCACCAAGTTACCCTTGA 1254 0.4083 MASSSSSHSFFTTCVLFLFFLYLSCFFNNLDAKHSIINTHKHQHRHNHIHNPRLYRAFLALQAWKHVIYSDPKNITSNWVGPSVCNYTGIYCAPSLDDPKITVVAGIDLNHADIAGFLPEELAFLSDLSLLHLNSNRFCGIIPKTFTNLTHLYELDLSNNRFVGPFPSVVLSLPSLAYLDLRYNEFEGPLPPELFNKPFDAFFLNNNRFTSSIPRNLGKSKASVMVFANNKFGGCLPESIVNFADTLEELLLINTSISGCLPQQVGFLYKLRVLDVSFNNIVGPIPYSLAGLSHLEQLNLGHNMMSGIVPMGVCELPNLVNFTFSYNFFCEEEGICKNLTSKKIVFDDRRNCLPEKPLQRSEKECSHKLEHPVDCFELCCVQGGLGNNNVSAGSMAIPPSAIPPAALPAPLVAPSYP* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4605 417 Gene3D Ribonuclease Inhibitor 226 367 IPR032675 -
Mal2g4605 417 Pfam Leucine rich repeat 128 185 IPR001611 GO:0005515
Mal2g4605 417 Pfam Leucine rich repeat 270 327 IPR001611 GO:0005515
Mal2g4605 417 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 1 414 - -
Mal2g4605 417 PANTHER EXTENSIN-LIKE PROTEIN 1 414 - -
Mal2g4605 417 SUPERFAMILY L domain-like 58 343 - -
Mal2g4605 417 Gene3D Ribonuclease Inhibitor 58 225 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4605 Mal-Chr2 96965114 96966367 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4605 50 380 Leucine-rich Repeat extension Gene Families AT3G24480 56.325 1.09e-134 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4605 - - gmx:100802803 633.254