Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4604 ATGGTTTGTTTGGGGTTTGATATGGTTGAGGTTGAAGCTCAAAAAAGGTTGGAACTTTGTTTTGTTAAGAGGATTGTGTTTGGTTTGTTGGTGTTTCTGTTGTTTCTTAGTCCTGTTGTTGGTCTCAGACCCTTGAGGGATAAAACTGGCTCTTGGGGTGATGAGTGGATTTTCTCTGGTAAAGAGGAAAGCGACTTAGGTCCATTTTCACAATGGAATATAACTGGAACTTACAGAGGGACGTGGAAGTTTTTAGATACCATAAATGGCTCTTATAAATTTCCGGACATCAGAAAAATAAATGGAAATTCTGTAATTGAATTGGTTAGTACGCCCACAAAGATAACTGGTGTACATTATGTGCAGGGGGTAATTATATTCCACGACGTGTTCGACAACGAATACAATGTTGGGGGTGCCCAAATCAAAATAGAAGGTGTATATATATGGCCTTTTAGACAACTTCGAATGGTAGCCAACAGCGGAAAAGAGGGAGGGTTGAATCAAGATGGAGATTATATTTTATCCAATCCATATCATCTGCTTGGAGTTTTCTCATCTCAAGTATTCCAAGAATCTTCGCGGCATACGATGTGGAGAAGAAAGCATTTTCCATTGCATGGCATGGAGAAAAACTGTAATGTTGAAATTTCAGCACGGGTTTCACGCTTGTCATCGTCAAAACATGATGGGGAGCATGATTCTTTTCAGCTGGAAGGATTAATGGAAAGTCCGTCCGTGGATGACGATGGTGATTGCATCTCACCATTACAGTTAAATGCAACATCTATTAATATTGGAGTCTACTACAATAAAGCAGTGAACTATACCTTGATGGTTACTTTTGTCTCATTCTTGCAAGTTCTTCTGTTGATTCGGCAAATGGAGCATAGCAACACACAATCTGGGGCAGCTAAGGTTTCAATAATAATGATTGGTCAGCAAGCTATAGTGGATGCATATCTTTGTCTTGTACATCTGACTGCGGGAATACTAGTTGAGTCCTTGTTCAATGCTTTTGCAACCGCTGCATTCTTCAAGTTTGTAGTTTTCTCAATATTTGAGATGAGATATCTCCTTGCCATTTGGAAAGCAAGTCGGCCTTTGAGTAATGGTGAAGGTTGGGAGATAATGAGGCGTGAGCTTTCGGTTCTATACAGCCGTTTCTATGGGATTTTGTTGGGCGGTATTCTATTCATGTATGAATTCCATAATTATTTGAGACCTATTCTGCTTCTTGTATACTCGTTTTGGATACCTCAGATAATCACCAATGTTGTTCGCGATTCACGCAAACCATTGCATCCTCATTATATATTAGGCATAACCATTACTCGCCTAGCAATCCCATTATATGTTTTTGGTTGTCCTAACAACTTCTTGCGCATAGAACCAGATCAGAGCTGGTGTGCTTGTTTGGTTTTATTTACTGGATTTCAAGCTGCAATTCTCCTTCTTCAACATTACCTCGGCTCCCGTTGGTTCATTCCTCATCAGATTCTACCTGAGAAATACAGCTACTATAGGAGGTCTTCTCAGGATACAAATCATGCCACAGACTGTGTTATTTGCATGACAGCCATTGATCTCACGCCGCGATCAAATGATTGCATGGTAACGCCTTGTGATCATTTTTTCCACACTGGCTGTTTACAAAGATGGATGGATATAAAGATGGAGTGCCCAACATGCCGGCGCCCGCTCCCACCTGCATAA 1716 0.4068 MVCLGFDMVEVEAQKRLELCFVKRIVFGLLVFLLFLSPVVGLRPLRDKTGSWGDEWIFSGKEESDLGPFSQWNITGTYRGTWKFLDTINGSYKFPDIRKINGNSVIELVSTPTKITGVHYVQGVIIFHDVFDNEYNVGGAQIKIEGVYIWPFRQLRMVANSGKEGGLNQDGDYILSNPYHLLGVFSSQVFQESSRHTMWRRKHFPLHGMEKNCNVEISARVSRLSSSKHDGEHDSFQLEGLMESPSVDDDGDCISPLQLNATSINIGVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSIIMIGQQAIVDAYLCLVHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPLSNGEGWEIMRRELSVLYSRFYGILLGGILFMYEFHNYLRPILLLVYSFWIPQIITNVVRDSRKPLHPHYILGITITRLAIPLYVFGCPNNFLRIEPDQSWCACLVLFTGFQAAILLLQHYLGSRWFIPHQILPEKYSYYRRSSQDTNHATDCVICMTAIDLTPRSNDCMVTPCDHFFHTGCLQRWMDIKMECPTCRRPLPPA* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4604 571 PANTHER TRANSMEMBRANE E3 UBIQUITIN-PROTEIN LIGASE 1-LIKE 14 571 - -
Mal2g4604 571 SMART ring_2 521 564 IPR001841 -
Mal2g4604 571 Pfam Ring finger domain 520 565 IPR001841 -
Mal2g4604 571 SUPERFAMILY RING/U-box 503 570 - -
Mal2g4604 571 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 506 571 IPR013083 -
Mal2g4604 571 SMART ringv_2 520 565 IPR011016 GO:0008270
Mal2g4604 571 ProSiteProfiles Zinc finger RING-type profile. 521 565 IPR001841 -
Mal2g4604 571 PANTHER RING ZINC FINGER PROTEIN 14 571 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4604 521 568 C3H Transcription Factor Family AT4G12190 39.583 1.35e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4604 K23788 - gmx:100817871 1036.94