Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4573 ATGGCGAATTCACGCCCATCTAAACGCCACAAAATCAGCAGGGGGGAGGATGATTATATGCCTGGAAACATTTTAGAGATCGAGCTTCGTAATTTCATGACATTTGATTACTTAAAATGTAAACCTGGGCCTCGGTTGAATCTCGTAATTGGGCCAAATGGTTCTGGAAAGAGTTCTCTGGTATGTGCTATTGCTCTTGGTCTCTGTGGAGAGCCCCAGTTGCTTGGGCGAGCCACGAGTATTCAGGCATTTGTGAAGCGGGGAGAAGATTCTGGGCACATTAAGATTACCTTGAGGGGGGACCATAAAGAGGAGCACATTACAATTATGCGTAAAATAAACACTAGCAACAAGTCTGAATGGGTTTTAAATGGAAATATTGTGCCCAAAAAGGATGTTGCTGAAACCATTCAGAGGTTTAACATCCAAGTGAATAATTTGACTCAATTTTTACCGCAAGACAGGGTCTGTGAGTTTGCAAAGTTAACTCCTGTGCAACTTCTGGAAGAGACAGAAAAGGCTGTTGGTGATCCACAGCTTCCAGAGCAACATCGTGCACTTATTGATAAAAGTCGTGCATTGAAGCATGTTGAACTGTCTCTGGAGAAAAATGAAGGAACTTTGAATCAGTTGAAGGAACGTAATGCTGAATTAGAGAAGGATGTTGAACGTGTTCGTCAAAGAGATGAACTTCTTGCCAAGGCCGAATCAATGAAAAAGAAATTGCCATGGCTGAAGTATGATATGAAGCAGGCTGAATATCGTGAAGCTAAGGAGCGTGAGAAGGCTGCAGCAAAGGAGTTTGAGAAGGCTGCAAAATTATTAAACGAACTTAAAGAGCCTATCAAGAAACAAAAGGACGAGAAAGCTGCATTAGATGCAAAATGCAAAAAGGTTAATAGTCGAATAAATGAGAATGCCAAGAAGAGAATGGAACTTACGGAGAAGGAGAACCATTTGGAAGTGGAGTTAAAAGGAAAGTACAAAGAGATGGACGAGTTGAGGAGGCAGGAAGAAACTCGGCAACAGAAATTTAACAAAGCCAGGGAGGAACTTGCTGCTGCTGAACTTGAACTTCAGAGTCTAAACCCTTATGTACTTCCCAAGGATGAGCTTCAAAGACTGAGAGAAGAAATTGTGGAGTTGGATAGTTCTGCTACTCAAGCGAGAGATAACAAGTCAGAAGCAGAAAAAGAAATAAAGATTAAAAGGTCCTCCTTGATGAGGTGTAAAGAGAGGTTGAAGGAAATGGGTGATAAAAGTCATAAGTGTTTGAATGCATTGCGAAGATCTGGGGTTGAAAAAATTTTTGATGCTTATAAATGGGTCCAAGAACATCGCCATGAATTCAACAAGGAGGTTTATGGCCCAGTTTTAGTTGAGGTGAATGTCTCAGATCAGTGTCATGCTGGATATCTAGAGGGTCAAGTTGCTTGGTACACCTGGAAGTCTTTCATAACACAGGATCCTCGTGATCGGGACTTTTTGGTGAACAACCTACGGAACTATGATGTACCAGTTTTAAATTATACAGGTCGTGATAGCCGAAGAGAGCCGCCCCCTGAAATATCTGCTGATATGCATGCTCTTGGTATCCACTCCCGTTTGGACCAAATTTTTGATGCTCCCGTTGCTGTCAAGGAGGTGTTGATTAGCCAATCTAATCTTGATCACTCATTTATTGGATCGAAAGAAACTGATCAGAAAGCTGATGGGGTCCCAAAATTGGGAATTACTAGTTTATGGACACCAGAAAATCACTATCATTGGTCTAAGTCTAGATATGGAAATCATGTCTCAGCAGTTGTTGAACAAGTGCAACGCCCACAACTTCTACTGAATAATTTAAATGTGAGGGACATTGAGGATCTGAGCTCCCAGGAAAGGGATCTTCAAGAACAAATTGCTTCCTCGGAGGAAAGTGTCAAAAGGTTTCAAGACGAGGAAAGAAGCTTCATAAATCGGGCGGCTAATCTTCGTAAACGGATGGAGGACATTCGTTTTGAAGCACAAAATAAGCAAAAAGAGCGACAAACAATTATTAGGCGTATTGAACAAAAGAAAGGGATACTGAAATCGATGGAGGAGCAGGATGATTTAGATACCGAGTTAGCAAAGCTTGTTGATCAGGCAACAAAATGTAACATTCAGCGATTCAATAATGCAATAAAAATTAAGAATCTTCTTGTTGAAGCTGCGGGTTACAGACGAAGTTTTGTTGAACAACGTATGACTTTCATTGAATTTGATGCAAAGATTGGAGAAGCGGAGGCCAATCTTAAGCAGCATGAAAATATTGCTCTGCAGGCATCATTGCACTTTAATAACGCTAAGAAAGAGTCTGAAGAATGTAGACAGAAGCTTACAGATTTATTGAACTATGCTAAGTCAATTGCCCGGCTTACACCTAACCTAGAGAAGGAATTTCTTGAGATGCCTACTACAATTGAGGAGTTGGAAGCAGCTATCCAAGATACCACTTCTCAAGCAAATTCAATCCTTTTTGTCAATAGTAACATATTGGAACAATATGAGGCTCGTCAAAGACAGATAGAAGATCTTGCAAAAAAACTTGATGCAGACAAGAAGGAATCTACAAGGTGTCTAGCTGAATTGGATAACATTAAGGGAAAATGGCTCCCTACATTGAGAAACCTTGTGGCCCAGATAAATGAAACTTTTAGTCAAAATTTTCAACAGATGGCTGTTGCCGGAGAAGTTTCATTAGATGAGCATGATATGGACTTCGATCAATTTGGAATACATATAAAAGTCAAATTCAGAGAAAGTGGACAGCTTGAAGTTCTCAGTGCCCATCATCAATCTGGAGGGGAGCGATCAGTTTCAACTATTGTTTATCTTGTTTCACTTCAAGATCTTACAAACTGCCCATTTAGAGTTGTTGATGAGATCAACCAAGGGATGGACCCAATAAATGAAAGGAAGATGTTTCAGCAATTAGTGAGAGCAGCAAGCAAGCCAAATACACCACAGTGTTTCTTACTTACCCCAAAGTTGTTACCAGATCTGCAATATAGTGAGGCATGCAGTATATTGAATGTGATGAATGGCCCTTGGATTGAGCAACCCTCAAAGGTCTGGGCCGCTGGTGATCGATGGAGTATTATCACTAGACATGTTGGAGAGACCATTTGTTGA 3159 0.4074 MANSRPSKRHKISRGEDDYMPGNILEIELRNFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLCGEPQLLGRATSIQAFVKRGEDSGHIKITLRGDHKEEHITIMRKINTSNKSEWVLNGNIVPKKDVAETIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPEQHRALIDKSRALKHVELSLEKNEGTLNQLKERNAELEKDVERVRQRDELLAKAESMKKKLPWLKYDMKQAEYREAKEREKAAAKEFEKAAKLLNELKEPIKKQKDEKAALDAKCKKVNSRINENAKKRMELTEKENHLEVELKGKYKEMDELRRQEETRQQKFNKAREELAAAELELQSLNPYVLPKDELQRLREEIVELDSSATQARDNKSEAEKEIKIKRSSLMRCKERLKEMGDKSHKCLNALRRSGVEKIFDAYKWVQEHRHEFNKEVYGPVLVEVNVSDQCHAGYLEGQVAWYTWKSFITQDPRDRDFLVNNLRNYDVPVLNYTGRDSRREPPPEISADMHALGIHSRLDQIFDAPVAVKEVLISQSNLDHSFIGSKETDQKADGVPKLGITSLWTPENHYHWSKSRYGNHVSAVVEQVQRPQLLLNNLNVRDIEDLSSQERDLQEQIASSEESVKRFQDEERSFINRAANLRKRMEDIRFEAQNKQKERQTIIRRIEQKKGILKSMEEQDDLDTELAKLVDQATKCNIQRFNNAIKIKNLLVEAAGYRRSFVEQRMTFIEFDAKIGEAEANLKQHENIALQASLHFNNAKKESEECRQKLTDLLNYAKSIARLTPNLEKEFLEMPTTIEELEAAIQDTTSQANSILFVNSNILEQYEARQRQIEDLAKKLDADKKESTRCLAELDNIKGKWLPTLRNLVAQINETFSQNFQQMAVAGEVSLDEHDMDFDQFGIHIKVKFRESGQLEVLSAHHQSGGERSVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILNVMNGPWIEQPSKVWAAGDRWSIITRHVGETIC* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4573 1052 Coils Coil 837 864 - -
Mal2g4573 1052 Coils Coil 317 358 - -
Mal2g4573 1052 CDD ABC_SMC5_euk 925 1027 - -
Mal2g4573 1052 Coils Coil 372 406 - -
Mal2g4573 1052 Coils Coil 282 302 - -
Mal2g4573 1052 Coils Coil 656 676 - -
Mal2g4573 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 774 1003 IPR027417 -
Mal2g4573 1052 Pfam RecF/RecN/SMC N terminal domain 24 993 IPR003395 -
Mal2g4573 1052 Coils Coil 194 235 - -
Mal2g4573 1052 Gene3D - 841 1022 IPR027417 -
Mal2g4573 1052 Coils Coil 621 648 - -
Mal2g4573 1052 Gene3D - 23 231 IPR027417 -
Mal2g4573 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 992 IPR027417 -
Mal2g4573 1052 Coils Coil 247 278 - -
Mal2g4573 1052 CDD ABC_SMC5_euk 22 179 - -
Mal2g4573 1052 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 18 1047 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4573 Mal-Chr2 95854142 95885853 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4573 5 1045 Structural Maintenance of Chromosomes family AT5G15920 61.479 0.0 1282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4573 K22803 - gmx:100778678 1637.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g4573 2 95854142 95885853 Mal2g4573 2 95854142 95885853 ECH