Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4534 ATGAGCAAACCAAGTTGTTCATTTGTTCTTATACCCTTTCTCATTTTCACTCTCTTTGTGGCTGAAATCCATGGAAGCAAACAAAGTAGAGCTCTTGACAAATTGCAAAAGTCAAAGTTCAATACAAATTCACAAATTGATATGAGTCACTTCAAGGCACAAGAAAATATTGTGCTTGATGCAATGGTTCATTCTCAAGATGGTATGAAAGAAAAAGATAGAATTGAGAAGCTACCAGGTCAACCAAATGTGAAATTCTCTCAATATGGAGGGTATGTCACTGTGGACAAATTAGCAGGACGTGCTTTTTACTATTACTTTGTGGAAGCTCATCATTCTAAAGAAACATTGCCACTTCTTCTTTGGCTCAATGGAGGTCCTGGATGCTCATCTCTTGCTTATGGAGCAATGCAAGAACTTGGACCCTTCCGTGTGAACAGTGATGGGAAAACCCTTCACAAAAATAACTATTCATGGAACTATGCTGCAAATGTATTGTTCCTTGAGTCACCAGCTGGGGTAGGATTTTCTTACTCAAACAAATCATCTGATTATGACAACAATGGAGATAGAAAAACAGCTGCAGATAATTATGTGTTTTTAGTGAATTGGTTGGAAAGATTTCCTGAATATAAGAATAGAGATTTTTTCATTGCTGGGGAAAGCTATGCTGGTCATTATGCCCCTCAACTTGCACACAATATTCTCTACCATAACAAAAAGGCTAATAGGACAATTATCAACCTCAAAGGAATTATGATTGGGAATGCAGTGATCAATGACGACACAGATGATCAAGGAATGTACGATTTTCTTGCTAGTCATGCAATCATATCAGACCAAGCAGCATATAACATCAACACATTTTGTAATTTCTCATCAATTTCTAATCAAACTACTGAGTGCAATGAAGCAGCAAGTGAAGTTTATAAGAACACGTTGTTCCTTGATATATACAACATCTATGCTCCAGTCTGCACTAATCACAACCTCACTAACCGTCCCAAGAAGATCTCGGTTGTTCTTGATCCTTGCAGTGACGATTACGTACACGCATATTTAAACCGGGCTGATGTGCAAGAGGCCCTCCATGCCAATGTCACCAAGCTCAAATTTGACTGGGAGCCCTGCAGTAATATCATTTCAAAATGGGGGGATAGTCCTTCAACAATCATTCCCCTTTTACATGAGTTCCTAAATAATGGACTAAGGGTGTGGATTTTTAGTGGTGATATAGATGGAAGGGTGCCTGTTACTTCAACCAAATATTCCATTAAGAAGATGAAGCTTCCCATTGAGACTACTTGGTATCCTTGGTTCATAAAGGGAGAGGTTGGTGGCTATGCTGAAGTATACAAGGGAGGTCTAACTTTTGCCACTGTGAGAGAAGCAGGACATCAAGTGCCAAGCTATCAGCCAGCAAGAGCCCTCTCTTTAATCAAGCATTTCTTAAATGGCACTCCTCTTCCTAATACTCAAAGATTATATGACTAA 1494 0.3902 MSKPSCSFVLIPFLIFTLFVAEIHGSKQSRALDKLQKSKFNTNSQIDMSHFKAQENIVLDAMVHSQDGMKEKDRIEKLPGQPNVKFSQYGGYVTVDKLAGRAFYYYFVEAHHSKETLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLHKNNYSWNYAANVLFLESPAGVGFSYSNKSSDYDNNGDRKTAADNYVFLVNWLERFPEYKNRDFFIAGESYAGHYAPQLAHNILYHNKKANRTIINLKGIMIGNAVINDDTDDQGMYDFLASHAIISDQAAYNINTFCNFSSISNQTTECNEAASEVYKNTLFLDIYNIYAPVCTNHNLTNRPKKISVVLDPCSDDYVHAYLNRADVQEALHANVTKLKFDWEPCSNIISKWGDSPSTIIPLLHEFLNNGLRVWIFSGDIDGRVPVTSTKYSIKKMKLPIETTWYPWFIKGEVGGYAEVYKGGLTFATVREAGHQVPSYQPARALSLIKHFLNGTPLPNTQRLYD* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4534 497 Pfam Serine carboxypeptidase 80 486 IPR001563 GO:0004185|GO:0006508
Mal2g4534 497 ProSitePatterns Serine carboxypeptidases, serine active site. 218 225 IPR018202 GO:0004185
Mal2g4534 497 SUPERFAMILY alpha/beta-Hydrolases 76 490 IPR029058 -
Mal2g4534 497 Gene3D - 345 381 - -
Mal2g4534 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 178 IPR001563 GO:0004185|GO:0006508
Mal2g4534 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 456 469 IPR001563 GO:0004185|GO:0006508
Mal2g4534 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 167 IPR001563 GO:0004185|GO:0006508
Mal2g4534 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 204 229 IPR001563 GO:0004185|GO:0006508
Mal2g4534 497 PANTHER CARBOXYPEPTIDASE 11 490 - -
Mal2g4534 497 Gene3D - 391 486 - -
Mal2g4534 497 Gene3D alpha/beta hydrolase 69 328 IPR029058 -
Mal2g4534 497 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 490 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4534 Mal-Chr2 93498840 93507732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4534 353 489 Calmodulin-binding Proteins AT2G22960 31.387 2.66e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4534 K16297 - gmx:100783864 742.265