Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4498 ATGGAGCAACAACAACATCATCCAAGAAAACTTGTACCTTGGAATCGTATTAGTAACGATGGTGGTGTCAATGATATCATTCTTGATGCTCTTGATATAATGGATGCTTTTGGTTTCACTCCTATTTCTCTCAACAATCAAACTCCATCAAGAATGTCTGAAACAAATTGGATGCAAACTATAAACACCACGTTATATATTCTAAGTGGAGTTATGGAGCAACAACCACGTTATATAAGAAGTCTTATAAATGCAGAAAGTGATTATGTAAGGATTCTGAACGCTATTGATCTACGTCGCTCTACTCTTTATCACAATCTTGGTATAGATCAGTCAACATGGTTCACTCTCTTGCCTACTAACCACATCAACGAGGTACGGACTAGTACAAGAAATATTGAAGAAACTATCCAAAGGCGGCATTCTTATCGCAATCTTTCAAGAATTAGAGTTGAAGAAGTAAAGGAGTCTGAAGCTATGATGTGTTCCATCTGTTTGACGGAGCTTTTGGTTGGGTCGAAAGCAACCCAATTGTCGTGTTCACATGTGTATCACGAAGCATGTATTATGAAATGGCTAGATAGATCAAACACATGCCCTTTGTGTCGCCAGATTGTTCCTAACATGTGA 630 0.381 MEQQQHHPRKLVPWNRISNDGGVNDIILDALDIMDAFGFTPISLNNQTPSRMSETNWMQTINTTLYILSGVMEQQPRYIRSLINAESDYVRILNAIDLRRSTLYHNLGIDQSTWFTLLPTNHINEVRTSTRNIEETIQRRHSYRNLSRIRVEEVKESEAMMCSICLTELLVGSKATQLSCSHVYHEACIMKWLDRSNTCPLCRQIVPNM* 210
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4498 209 ProSiteProfiles Zinc finger RING-type profile. 162 203 IPR001841 -
Mal2g4498 209 CDD RING-H2_PA-TM-RING 162 203 - -
Mal2g4498 209 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 84 204 - -
Mal2g4498 209 SMART ring_2 162 202 IPR001841 -
Mal2g4498 209 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 84 204 - -
Mal2g4498 209 Pfam Ring finger domain 161 203 IPR001841 -
Mal2g4498 209 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 121 208 IPR013083 -
Mal2g4498 209 SUPERFAMILY RING/U-box 143 207 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mal2g4498 Mal-Chr2 91614751 91619126 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4498 146 203 C3H Transcription Factor Family AT4G12190 50.794 2.53e-15 66.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4498 - K22378 mtr:MTR_3g025550 101.293