Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4475 ATGTCATCTCTTACTATAATCTCAGCTACCGAGAATCATTTTAATGGCTCTCTTCCACCCAAAATGTTCAACACCCTTTCTAATCTCCAAGTGTTTTATATAAGTGACAATAATATCTCAAGTCTAATGCCCAATTCTGTTGCAAATGCTTCCACCCTTGAAAGACTTGATATTAGCAAAAACTATTTTGTCGGACAAGTTCCAAGTCTTGGGCGGCTACAACATCTTTGGAGGCTAAATTTAGAAATAAATAATTTTGGAGACAATTCAACTAAGGATTTGAAATTTTTAGAATCATTGACAAATTGTAGTGAGTTGCAAGGAGTTTCTATATCTTATAATAATTTTGGAGGTAGTTTGCCAAGTTCCATAGGTAACTTAACTGCCCAATTTAGTCGACTGTATATTGGGGCTAATCAAATATCAGGGAAAATTCCTTTGGAATTGGGAAATCTAAATAATTTAATTCTCTTGACCATGAATGACAATAGTTTTGAAGGGACGATTCCTTCAACTATAGGGATGTTTCAAAAAATGCAGTTGTTAGATTTGCACGGAAACAAGTTGTCAGGAGAAATACCATCCTCCATAGGCAACCTCAGTCAGCTATTTCATTTAGGTTTAGGGAAAAATAGGTTAGAAGGAAATATTCCTTCAAGTATAGGGAATTGTCAAAACTTACAAATGTTAAACCTTTCGGAAAACAACCTTAGAGGAACCATACCCTTAGAGGTTTTCAGTCTTTCACCTTTAACAATAGGATTGTACTTATCACACAACTTACTGAGTGGAAATCTACCTAATGAAGTCGGTAATTTACAACATATTGTGAAGTTTGATGTCTCTGAAAACCGACTGTCTGGTGAAATTCCTAGAACTGTGGGGGAATGCATTAGCTTAGAATACCTTGTTTTGATCGGAAACTCATTCAATGGAAGCATACCATCCTCTTTGGCATATCTCAAAGGTCTTCGAATTTTAGACCTCTCAAGAAACCAATTGTCTGGGTCAATTACAAAAGTTTTGCAAAGTATTTCTTTCTTAGAATACTTCAATGCATCATTCAACATGTTGGAAGGAGAGGTACCAACTGAAGGTGTCTTTCGAAATGTAAGTGCATTGACAGTAATTGGAAACAACAAGCTTTGCGGTGGAGTTTTAGAGCTGCATCTACCTTCATGCCCTATTAAAGGTATGAAATCTTCGAAGCACCGTAACTTCAAGTTAATGACACTGATAGTTAGTGGGGTTTCTTTTCTTCTCATTATGCTATTTATTCTAAGTATATATGGGAAAAGGAAAACAAATAAAAAATCATATTTTGACTCACTGATAGCTAATCAGATGGTTAAGGTTTCATACCAAAGCCTACACACTGCAACCAATGGGTTCGCAACAAGCAACTTGATAGGATCAGGAAATTTTGGGACCGTTTACAAAGGAACACTTGAGTCGATAGGTGGAATTGTTGCAATAAAAGTCTTAAACCTTGTAAAGAAGGGAGCTGACAAGAGTTTCATTGTCGAATGTAATGCACTTAAAAATATTAGACACCGAAATCTGGTTAAAATTTTGACATGTTGTTCCAGCACAGATTACAAAGGAAATAAATTTAAAGCTCTCATATTTGAGTACATGAGAAATGGAAACTTAGAAAGTTGGTTGCATTCCACCACTAAAACTACTGTTCAACCCAAAACATTGACTCTTGAGCAAAGGGGCCCAAACCCCCTCTTGCCCCCTTGTACATCCGTGCCTGTTATTACTGATGTTGCGTCAACATTTTGTTATATTCATTATGAATGCGAGCAACCTGTCATTCGTTGTGATTTAAAGCCTGCAAATGTTCTTCTTAATGACTACTTGGTAGCTCAAGTGAATGATTTTGGCTTAGCAAAGTTGTTCTCAAGTGTTGGAGTCTCTCTTATGCAAAGTAGCACAATTGGAATAAAAGGGACTATTGGCTATGCGCCCCCAGAGTATGGTATAGGATCCGAGGTTTCAATTGAAGGTGACATGTATAGCTTTGGAATAATGGTATTGGAAATGTTATCTGGAAGGAGACTCACAGATGAAATGTTTAAAGATGATCATAATCTCCATAATTATGTGAAACTTTCAATTCCAGATAACCTTTTTCAAATTGTGGATCAGTCTATTCTCCTCATTGAATTGGAACCAAATAATGACAATGGGAACCATGGCGGTATACATCCCAATGTAGAGAAATGTTTACTTTTAATTTTTAGAATTGCACTTTCATGTTCAGTGGAATCACCAAAAGAAAGAATGAATATGGTTGATGTTATAAGAGAGCTCAATATCATTAAATGTTTCTTTCCTATTGAGGTTCATCGAAGACAAGGTGCATTACATCCACAAATCATGTGA 2391 0.3605 MSSLTIISATENHFNGSLPPKMFNTLSNLQVFYISDNNISSLMPNSVANASTLERLDISKNYFVGQVPSLGRLQHLWRLNLEINNFGDNSTKDLKFLESLTNCSELQGVSISYNNFGGSLPSSIGNLTAQFSRLYIGANQISGKIPLELGNLNNLILLTMNDNSFEGTIPSTIGMFQKMQLLDLHGNKLSGEIPSSIGNLSQLFHLGLGKNRLEGNIPSSIGNCQNLQMLNLSENNLRGTIPLEVFSLSPLTIGLYLSHNLLSGNLPNEVGNLQHIVKFDVSENRLSGEIPRTVGECISLEYLVLIGNSFNGSIPSSLAYLKGLRILDLSRNQLSGSITKVLQSISFLEYFNASFNMLEGEVPTEGVFRNVSALTVIGNNKLCGGVLELHLPSCPIKGMKSSKHRNFKLMTLIVSGVSFLLIMLFILSIYGKRKTNKKSYFDSLIANQMVKVSYQSLHTATNGFATSNLIGSGNFGTVYKGTLESIGGIVAIKVLNLVKKGADKSFIVECNALKNIRHRNLVKILTCCSSTDYKGNKFKALIFEYMRNGNLESWLHSTTKTTVQPKTLTLEQRGPNPLLPPCTSVPVITDVASTFCYIHYECEQPVIRCDLKPANVLLNDYLVAQVNDFGLAKLFSSVGVSLMQSSTIGIKGTIGYAPPEYGIGSEVSIEGDMYSFGIMVLEMLSGRRLTDEMFKDDHNLHNYVKLSIPDNLFQIVDQSILLIELEPNNDNGNHGGIHPNVEKCLLLIFRIALSCSVESPKERMNMVDVIRELNIIKCFFPIEVHRRQGALHPQIM* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4475 796 SMART LRR_typ_2 321 344 IPR003591 -
Mal2g4475 796 SMART LRR_typ_2 224 248 IPR003591 -
Mal2g4475 796 SMART LRR_typ_2 26 49 IPR003591 -
Mal2g4475 796 SMART LRR_typ_2 176 200 IPR003591 -
Mal2g4475 796 Pfam Leucine rich repeat 4 62 IPR001611 GO:0005515
Mal2g4475 796 PANTHER LRR RECEPTOR-LIKE KINASE 1 783 - -
Mal2g4475 796 Gene3D Transferase(Phosphotransferase) domain 1 546 780 - -
Mal2g4475 796 ProSiteProfiles Protein kinase domain profile. 464 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g4475 796 SMART serkin_6 464 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g4475 796 ProSitePatterns Protein kinases ATP-binding region signature. 470 500 IPR017441 GO:0005524
Mal2g4475 796 Gene3D Ribonuclease Inhibitor 1 394 IPR032675 -
Mal2g4475 796 PANTHER OS04G0122200 PROTEIN 1 783 - -
Mal2g4475 796 Pfam Protein kinase domain 466 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g4475 796 SUPERFAMILY Protein kinase-like (PK-like) 438 776 IPR011009 -
Mal2g4475 796 SUPERFAMILY L domain-like 2 192 - -
Mal2g4475 796 Gene3D Phosphorylase Kinase; domain 1 426 545 - -
Mal2g4475 796 SUPERFAMILY L domain-like 133 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4475 Mal-Chr2 90946052 90965663 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4475 1 780 Receptor kinase-like Gene Family AT3G47570 42.749 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal2g4475 Pkinase 2.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4475 - - gmx:100792724 976.467