Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4470 ATGGCAAGTTCAAGAGAAGTCAATTATCAAGCAAAGCAAGAAGGAGGTGATAATAGTACGGATAATATTGAAAAAATTTCCAAGACACCTTCAAGTACATCAAGACAGTGGTCAACATCAAGTTTAAGAAATCCAAGAATTGTGAGAGTTTCAAGAACATTTGGAGGCAAAGATAGGCATAGCAAAGTTTGCACAATAAGAGGGTTAAGAGATAGAAGGATTAGGCTTTCAGTTCCAACAGCAATTCAATTATATGATCTTCAAGACAAACTTGGTTTAGGACAACCAAGTAAAGTAATTGATTGGTTACTTGAAGCAACAAAATTTGACATTGATAAACTTCCTCCACTTCAATTTCCTCAAAGCTTTTCACAATTTCATCCACTTCATCCACAAACCCTACTTCCTTTTCATGATCAATCAAGTAATATTGCTTCTCATGAACTTTCTCTTGGTCCTTTATATGATCCTAATTCCACATTTGTTGGAATTCAAAATCTTATGGCAAGGTCAAAATTTTGGGATATAGATTCAAGGGTTAAAGGTAAAGAAGTTGAAAGAGAGTACTTTAGTGAAAAGGGTAAGTGGATCAAAACAAATGAGGAAGAAAATCAAGTTGGAGAAGCTAGTTATAGCAATTTTCATCAAGTTCCAACTCAAAAGCTTTTTCCTATGGAGACTCACTCTAATTTTCTAAACAATTCTATGTCATATAACAACTACCATTCAGAAGCTTCTAATTTGTCATTATCTCAATTTGGTAGTAGTCATGGATTGTTCCAATCTCATCAACAAGTAGATCCAAATCAAAGTAATGGAAATGGTTTGCAATTCCCATTTTCTTTTCCAAATTCATCACAATTATTTAGTTAA 873 0.3333 MASSREVNYQAKQEGGDNSTDNIEKISKTPSSTSRQWSTSSLRNPRIVRVSRTFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLGQPSKVIDWLLEATKFDIDKLPPLQFPQSFSQFHPLHPQTLLPFHDQSSNIASHELSLGPLYDPNSTFVGIQNLMARSKFWDIDSRVKGKEVEREYFSEKGKWIKTNEEENQVGEASYSNFHQVPTQKLFPMETHSNFLNNSMSYNNYHSEASNLSLSQFGSSHGLFQSHQQVDPNQSNGNGLQFPFSFPNSSQLFS* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4470 290 MobiDBLite consensus disorder prediction 261 290 - -
Mal2g4470 290 Pfam TCP family transcription factor 56 171 IPR017887 -
Mal2g4470 290 PANTHER TRANSCRIPTION FACTOR TCP17 1 289 - -
Mal2g4470 290 ProSiteProfiles TCP domain profile. 56 114 IPR017887 -
Mal2g4470 290 MobiDBLite consensus disorder prediction 1 42 - -
Mal2g4470 290 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 289 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4470 Mal-Chr2 90776286 90777856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4470 39 240 TCP Transcription Factor Family AT5G60970 51.429 2.82e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mal2g4470 TCP 6.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4470 - - cam:101498052 456.447