LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g4462	ATGTGGAAATTTAAACCATTCGCGCACAAAGAGCAAAATGGTCTTGAAGGTCGTTCTATAGATGTTGGTAATCTCAAACTATATGTCCACAAGCTCATTGCTGAAGGAGGGTTCTCATGTGTCTACTTGGCTCGTGATGCTGTACATATGTCGAAACAGTATGCTTTGAAGCACATAATATGCAATGACGAAGAATCACTTGGATTGGTGAAGAAGGAGATAGCTGTCATGAAATTGTTGATAGGACATCCCAATGTTGTCACACTTCATGCTCATGCCATCTATGACATGGGTAGGACAAAAGAGGCATTCCTTGTAATGGAATTTTGTGAGAAGTCTCTTGTTAGTGCGCTGGAGAGCCGAGGAGCTGGTTATTTTGATGAGAGGCAGGTTCTTTTAATCTTCAGGGATGTGTGTAATGCAGTCTTCGCCATGCACTGCCAGTCCCCACCTATTGCTCACCGAGACTTGAAAGCAGAAAATCTTCTGTTGGGTTCAGATGGTTTGTGGAAGTTATGTGATTTTGGAAGCATTTCTACCAATCACAAACGTTTTGAGAAGCCAGAAGAAATGGGAATTGAGGAAGATAATATCAGAAAGTACACAACCCCCGCCTACAGAGCCCCTGAGATGTGGGATCTGTTCTTGAAAGAAGTCATTAGTGAGAAAGTGGACATATGGGCACTCGGGTGTCTCCTTTTTCGCATATGCTACTTCAAAAGTGCATTTGATGGGGAATCAAAGCTTCAAGTCTTAAATGGAAACTACCGCATTCCTGATTTACCTAAATTCAGTTCAACACTCACAGACTTGATCAGAGACATGCTTCAAGCTAGACCAGACGACAGACCAGATATCACGCAGGTTTGGTTTCGTGTTAATGAGCAGCTACCCATTGATTTACAAAAGTCATTACCTGACAGGCCACCTGAATCGCCCTCTTCCAACAATAACGAAGGTGCTTCAATGTCTACCCAAAAATCAAGTCCAATTCCTCGCAGAAATCCACCTCCTCCTCCATCATTTGCAGAACCCAAAACTACCGATCAGCCATCTCTTGCTTCTAGGGGAGGGGAAAGTGGGGGGCAGCTTGGTGCTTTCTGGTCCACTCTGCATGCAAAGGATTCACGTGTTCCTGAGGAAAAGGGCAAACCTATATATGATGAAGAACGATCTAGTCACCATGTTTCATTGAAACATGACAAAGTTCGTCCGGACAATGATCAGTTACCGAAAAATGTTGGTACTAACAAAGTGGCCAACACTCAAACTCAGACTGTAAAAAGCAATATACATGGAAAGTTACACAAGCCTGAAGCTGTATCTTCCAAGGACTTTGAAATAAATTTTTTCCCGGATAAAGGTCATGCAAATGAGAAGCATATGTCAAATCTGGAGAAGAAGAATAATAATTTCCAAGACCAGGCTTTTAACACTTTTGTTGCAGAGTTTGATACTGCTAAGCTAAACTCCGGGCATGGTAACAAATCCACAAGGGAAGAAGCATTAGAGTCTGAGGTGGAGAAACTCAAAGAGCAGCTAAAGGATGCTAACTTAGAGAAATCTGAAATCACTGCAAAGTACGAAAAGCTTACTGCTATCTGCCGTTCACAAAGGCAAGAATTGCAGGATCTCAAGCAAGCACTTGCAGCAAGAACTCCATCTCCTAATAGAGAGGGTTTGAGAACCTCTCCCGGAGTTGTATCATCTGCATCTTCGGATAGAAGTGAATGGAAAACTCCTAGTTCGGAACCAAAGTCATCATGGCAAGCTTTCCCGGAGGCAACCGAACCGTTTAAATCCCTTTCAGCAGACAATGCTTCAAAATCTGTTAGGTCAAGAAATGGTCAGCAGAACAAGCCGGCTACTCAACCAGCTGCTGATTTTGATTCTTGGGGTTTTGGCGCAGATACATTTAGTGCTGCTCGTGCTGGTACCGGTAGCCCACAGATGCCAAGACCTGGTGAAGGGAGTAAAGCTCAAGTTTTTGGTGAGGCAAAGGGTTTTGAGAGCAAATCAACTTCGCAGCCTGCTGGATGGGCTGGTTTTTAA	2052	0.4352	MWKFKPFAHKEQNGLEGRSIDVGNLKLYVHKLIAEGGFSCVYLARDAVHMSKQYALKHIICNDEESLGLVKKEIAVMKLLIGHPNVVTLHAHAIYDMGRTKEAFLVMEFCEKSLVSALESRGAGYFDERQVLLIFRDVCNAVFAMHCQSPPIAHRDLKAENLLLGSDGLWKLCDFGSISTNHKRFEKPEEMGIEEDNIRKYTTPAYRAPEMWDLFLKEVISEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKFSSTLTDLIRDMLQARPDDRPDITQVWFRVNEQLPIDLQKSLPDRPPESPSSNNNEGASMSTQKSSPIPRRNPPPPPSFAEPKTTDQPSLASRGGESGGQLGAFWSTLHAKDSRVPEEKGKPIYDEERSSHHVSLKHDKVRPDNDQLPKNVGTNKVANTQTQTVKSNIHGKLHKPEAVSSKDFEINFFPDKGHANEKHMSNLEKKNNNFQDQAFNTFVAEFDTAKLNSGHGNKSTREEALESEVEKLKEQLKDANLEKSEITAKYEKLTAICRSQRQELQDLKQALAARTPSPNREGLRTSPGVVSSASSDRSEWKTPSSEPKSSWQAFPEATEPFKSLSADNASKSVRSRNGQQNKPATQPAADFDSWGFGADTFSAARAGTGSPQMPRPGEGSKAQVFGEAKGFESKSTSQPAGWAGF*	684

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g4462	683	MobiDBLite	consensus disorder prediction	549	683	-	-
	Mal2g4462	683	Coils	Coil	493	548	-	-
	Mal2g4462	683	MobiDBLite	consensus disorder prediction	308	330	-	-
	Mal2g4462	683	CDD	STKc_GAK_like	29	298	-	-
	Mal2g4462	683	MobiDBLite	consensus disorder prediction	331	345	-	-
	Mal2g4462	683	MobiDBLite	consensus disorder prediction	668	683	-	-
	Mal2g4462	683	MobiDBLite	consensus disorder prediction	601	625	-	-
	Mal2g4462	683	PANTHER	SERINE/THREONINE PROTEIN KINASE	1	673	-	-
	Mal2g4462	683	SUPERFAMILY	Protein kinase-like (PK-like)	28	340	IPR011009	-
	Mal2g4462	683	Pfam	Protein kinase domain	30	289	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal2g4462	683	SMART	serkin_6	27	291	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal2g4462	683	Gene3D	Transferase(Phosphotransferase) domain 1	10	305	-	-
	Mal2g4462	683	MobiDBLite	consensus disorder prediction	374	408	-	-
	Mal2g4462	683	MobiDBLite	consensus disorder prediction	301	415	-	-
	Mal2g4462	683	ProSiteProfiles	Protein kinase domain profile.	27	297	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal2g4462	683	PANTHER	NUMB-ASSOCIATED KINASE, ISOFORM A	1	673	-	-
	Mal2g4462	683	MobiDBLite	consensus disorder prediction	557	590	-	-
	Mal2g4462	683	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	152	164	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g4462	Mal-Chr2	90512027	90515109	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal2g4462	26	292	Miscellaneous Gene Families	AT2G34180	30.605	4.91e-21	95.1

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	NAK	Mal2g4462		Pkinase	4.8e-39	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g4462	K08853		-	gmx:100808507	1038.87