Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4443 ATGGAACAAGGAAAAGAATCCAATTACTTCGAAAGAATTGAACGAGGAGCCAGTGGCAGTAAGGATGACTTATCTGTCAACTTTTACACTATTACCCCTAAAAAACCAAACTCTGCCTTATGTAAAGTTGCCAGAGTACGCTTACCCTCTGGATTTGAAATCACTGCTTATATACCCGATATTGGCCATAATTTACAAGAACATTCTGTAGTCTTAGTAAGAGGGGGAAGGGTTAAGGATTTACCTGGTGTGAGATATCACATTGTTCGAGGAATCCTAGATGCTTTCGGAGTAAAGGATCATCAACAAGGGCGTTCGAAATATGGGTCCAAAAAGCCAAAATAA 345 0.3971 MEQGKESNYFERIERGASGSKDDLSVNFYTITPKKPNSALCKVARVRLPSGFEITAYIPDIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGILDAFGVKDHQQGRSKYGSKKPK* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4443 114 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 17 114 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mal2g4443 114 TIGRFAM rpsL_bact: ribosomal protein uS12 20 114 IPR005679 GO:0003735|GO:0006412|GO:0015935
Mal2g4443 114 Gene3D - 2 114 IPR012340 -
Mal2g4443 114 CDD Ribosomal_S12 29 100 IPR005679 GO:0003735|GO:0006412|GO:0015935
Mal2g4443 114 PRINTS Ribosomal protein S12 signature 49 68 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mal2g4443 114 PRINTS Ribosomal protein S12 signature 18 33 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mal2g4443 114 PRINTS Ribosomal protein S12 signature 68 85 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mal2g4443 114 PRINTS Ribosomal protein S12 signature 33 48 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mal2g4443 114 PRINTS Ribosomal protein S12 signature 85 101 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mal2g4443 114 PRINTS Ribosomal protein S12 signature 101 113 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mal2g4443 114 SUPERFAMILY Nucleic acid-binding proteins 26 114 IPR012340 -
Mal2g4443 114 Pfam Ribosomal protein S12/S23 24 114 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mal2g4443 114 PANTHER S12-LIKE, 30S RIBOSOMAL PROTEIN S12 SUBFAMILY PROTEIN 17 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4443 Mal-Chr2 89899892 89900270 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4443 31 90 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 42.647 1.23e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4443 K02950 - egt:105951191 171.785