Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4440 ATGAATTATCAAAATCCAAATGGTTCCAATTCACGCGCCATCATTCCTGTTCCCAACGTACTGCAAAGCTACCGCAACAACACTCTGTCGGGGGAAGCTTCAACATCAAAGCAGAAGCTTCAACAACAATGCAAGGAGCTTGTTCGCACTGCGATGGACGGCGATCAACTTCAGTATCGTGAGATGGTTCGAAGAACGAGGTTGGTGTATGATTCCATTCGTGTGTCGGGTTTGGTGGAAGAAGAGAATAATCGTAAGGCCAGAAACGATATGAAAGCTTTTTCTTTAACAAACGGGGTGCAAGAAGAGAATAATCGTAGGATCAGAAACGATTTGATAGCTTCTTCTTTGATGAATGATCATGGTTTGTGGTTGAATCATGATAAGAAAATTATTGGTGCGGTTCCTGGTGTTTGTATTGGTGATGTTTTTCTCTATAGAATGGAAATGTGTGTGGTTGGTTTACATGGTCAACCACAAGCTGGGATCGACTTTTTACCTGCTAGTATGAGTTCTAATGGCGAACCAATTGCTACTAGTGTGATTGTATCTGATGGATATGATGATGTTGATCAAGGTGATATTATCATCTATTCTGGCCATGGTGATAAGAAGCAGGATCAGAAGTTGCAAGCTGGCAACCTTGCTATGGAGCGAAGTATGCATTATGGCTTTGAAATTAGGGTTATTCGAGGTGTTCGGTATGAAGGTGTTGCTTCTACTACTGGTAAGGTTTTTGTCTATGATGGGTTGTATAAGATAATTAAATATTGGTTTGAAGTTGGTGAATCTGGTTGTGGTGTTTATAAGTTTGTGTTATCAAGGATTCAAGGTCAACCTAAGATGGGTAGTATGATCCTTAAGGAAGCTAATATGCTTAAGAAGGGCCAATTGTGCTTTAATCCTATGTATGTTGTTTCTCATGATATTTCCAATGGGAAGGAGAATGTTGGTGTGAGGTTGTTTAATGACATTGATAACGATGACTATCCTATGCATTTTGAGTATCTTCCAAAGGCAGCTTTTCCGCAATTTGTGTTTCCACGGAGCATGACGACGAGGACGAGGGCGAGGGCGATAGCTTGTTGTGAATGCGTTGATGGATGTGTTTCTTCAATCAAGAATGGAAACACTATTGTTTATAGTAAAAGTGGGCTTCTTTTGAAAGGGAGGTCGTTAATTTATGAATGTGGTCCTTTTTGCATTTGTCCTCCACATTGCAGAAATCGTGTGACGCAAAAAGGTCTAAAACATAGGTTGGAAGTGTTTAGATCTAATGAGACTGGTTGGGGAGTTCGATCTTTGGACCTTATTCCAGCTGGGACTTTTATATGCGAGTTCACCGGAGTTGTTTTGACTATGCAGCAAGCGGAAATTTTGACCATGGATGGTGAACATAATTCATTGATATATCCAAACCGATTTTTTAATAGGTGGACTCAAGAATGGGGTGATTTATCAATGGTAGATGCTAATCATGTGCGCCCCTCATATCCTCCTTTAGATTTCGCATTGGATGTCTCAACAATGAGGAATGTTGCGAGCTATATCAGTCATAGCCCAACTCCAAATGTCTTTGTTCAATTAGTTCTCTTTGATCACGATAATTTGATGTTTCCCCACCTTATGGTATTTGCAATGGAGAACATCCCTCCAATGAGAGAGCTTAGTCTTGATCATGGGGTAGTAGCTGGTTTTGATGAGAAATTGACTGGAAAGCTCGCAATATGTAATTGA 1737 0.4036 MNYQNPNGSNSRAIIPVPNVLQSYRNNTLSGEASTSKQKLQQQCKELVRTAMDGDQLQYREMVRRTRLVYDSIRVSGLVEEENNRKARNDMKAFSLTNGVQEENNRRIRNDLIASSLMNDHGLWLNHDKKIIGAVPGVCIGDVFLYRMEMCVVGLHGQPQAGIDFLPASMSSNGEPIATSVIVSDGYDDVDQGDIIIYSGHGDKKQDQKLQAGNLAMERSMHYGFEIRVIRGVRYEGVASTTGKVFVYDGLYKIIKYWFEVGESGCGVYKFVLSRIQGQPKMGSMILKEANMLKKGQLCFNPMYVVSHDISNGKENVGVRLFNDIDNDDYPMHFEYLPKAAFPQFVFPRSMTTRTRARAIACCECVDGCVSSIKNGNTIVYSKSGLLLKGRSLIYECGPFCICPPHCRNRVTQKGLKHRLEVFRSNETGWGVRSLDLIPAGTFICEFTGVVLTMQQAEILTMDGEHNSLIYPNRFFNRWTQEWGDLSMVDANHVRPSYPPLDFALDVSTMRNVASYISHSPTPNVFVQLVLFDHDNLMFPHLMVFAMENIPPMRELSLDHGVVAGFDEKLTGKLAICN* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4440 578 Pfam SET domain 429 561 IPR001214 GO:0005515
Mal2g4440 578 SUPERFAMILY SET domain 297 562 IPR046341 -
Mal2g4440 578 ProSiteProfiles YDG domain profile. 133 275 IPR003105 -
Mal2g4440 578 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 8 569 - -
Mal2g4440 578 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 8 569 - -
Mal2g4440 578 ProSiteProfiles Pre-SET domain profile. 361 415 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal2g4440 578 ProSiteProfiles SET domain profile. 418 561 IPR001214 GO:0005515
Mal2g4440 578 SMART G9a_1 128 279 IPR003105 -
Mal2g4440 578 Pfam SAD/SRA domain 132 279 IPR003105 -
Mal2g4440 578 SMART set_7 418 567 IPR001214 GO:0005515
Mal2g4440 578 Gene3D - 130 283 IPR036987 -
Mal2g4440 578 SUPERFAMILY PUA domain-like 119 288 IPR015947 -
Mal2g4440 578 Gene3D SET domain 284 569 IPR046341 -
Mal2g4440 578 Pfam Pre-SET motif 310 410 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal2g4440 578 SMART preset_2 307 402 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal2g4440 578 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 12 578 IPR025794 GO:0016571
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4440 Mal-Chr2 89780876 89782612 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4440 114 562 Su(var)3-9 homologs AT1G73100 38.544 3.00e-86 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal2g4440 SAD_SRA 5.3e-41 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4440 K11420 - mtr:MTR_0376s0030 843.958