Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4429 ATGGCTAAACTATGTTCTTCTCACTCTTGTCTCTACATTCTCTATGTCTCACTGCATTATTACTTCTTCACTTGCTTAGCTATGAGTAGTAACAAAAACATCACCACTGATGAATTTGCACTTCTTGCATTCAAATCCTCTATTACCTTAGACCCTTACCACATGCTTAGTAATTGGTCAATCTCCTCTTCTAGTTCTTTCTCTTCATGCAATTGGGTTGGTGTCACTTGTGATGAGCATCATGGAAGAGTAAAGGCATTGAATCTTAGTAGCATGGGCCTTGAAGGTACAATTTCCCCTCAATTGGGAAATCTCTCTTTCCTTGTTATTCTTGATCTACATGGCAATAATTTCCATGGTGAGTTGCCACAAGAGTTACTTCACTTGAAGAGACTAAAGATGTTGGACTTGAGCTACAATGATTTTGTTGGAGAAATCCCTAGAAGGATAGGGGACTTATCAAAACTTCAATACTTGGATCTTAGCTATAATAATATTGTTGGATTTATTCCTCAATCTATATCCAACTTGTCACTGTTGGAGTACCTAAATTGGAGTTTTAATTTTATTGAAGGAACCATTCCAACTATTATTGGTCAACTTCTTCGGTTGAGTATTTTGGATTTTAAACATAACAAACTCTCTGGAATCATACCAACAACAATTTCCAACATGTCTTCACTTGAATTCATCTATTTATCTAATAACTCCTTATCAGGTGAAATTCCATTCTCCCTCTTCAATATCACTTCTTTGAGAGTTATGAACTTTGACGACAACAATTTAAATGGAAACCTCCCACCTGAGATGTGTGATCAACTTCCTCAACTTAAAATGTTTACTATAATTTCTAATCATTTTGAAGGAAGCATTCCTCGATCAATTGGTAACTGCACATCGCTACTAATATTAATTCTGCAAGACAACTTTTTTACAGGTTTGATACCTATGGAGATTGGCCATCTCAATCAACTTCAGGTTCTACAAATGGGAAATAATAGCTTGAGTGGATTTGTTCCTTCAAAACTCTTCAACATTTCAACATTGGAATATTTGCATCTTGAGCTAAATTCTCTCTCAGGCATGCTTCCATCCAATATGGGATTTGACCTTCCTAATCTAAAAGAGCTACACCTGTACAAAAACAAATTTGTCGGAAAAATTCCAAATAGTATATCCAATGCTTCAAACCTCATCATAGTTGATTTGAGTTGGAATGAATTTAGTGGAATTATACCCAACACTTTTGGAAATTTAAGATTCCTGAAATCACTCATTATAGGTGCCAATACTAATTTGACATTACAAGATGATTCTCTTGAATTCAACTTCCTCACTTCACTGACAAGTTGCACTAAACTTACACATCTTGAAGTATCAGGAAATAGTTTACTGTCAAAACTTCCCAAGTCCATTGGAAACTTATCTTTAGAAAACTTTTGGGCAAATTCTTGTGGAATTAGTGGAAATATTCCACTAGAAATCGGAAATATGAGCAACCTGATTCGCCTATCTCTGAGCAAGAATGATCTAAGTGGACCAATCCCAACTACAATTAAAGGGTTACATAAGCTTCAGTCTTTGAAACTTGAATACAATAGACTGCAAGGATCCATCACTAATGATCTTTGTGAACTTAGGAGTTTGAGTGAGTTGTATTTAACAAGCAATAAGCTTTTTGGAGTGTTACCAACATGCTTGGGAAATATGAGTTCTCTTAGAAATTTTCGCATTGGATCTAATAGGTTGACCTCTGAGATTCCTTCCTCCTTTTGGAATCTCAAAGATATTTTAGAGGTCAATTTATCATCCAATGCCTTAATTGGAAATCTTGCACCTGAGATTAAGAATTTGAGAGCTGTTGTAATATTAGATTTATCAAGAAATCAAATTTCAAGCAACATTCCTACAACCATCAGTTTCTTGAAAACTTTACAAACTCTCTCCTTGGAATATAACAAATTGAAAGGTTCTATCCCAACTTCAATTGGTGAAATGGTAAGCCTCAGCTTCTTGGACTTGTCTCAAAATCTTATAATTGGTGTGATCCCAAAATCTTTAGAGTCACTTTCTTCTCTTAAATACATAAATTTGTCATACAATGGATTGCAAGGAGAGATTCCTGATGGAGGACCTTTTGAAAAATTTACAGCGCAATCTTTCATGCATAATGAAGCACTTTGTGGAAGTGCTAGGTTAGAAGTACCTCCTTGTGATGATATACAGATTAGGAAAAAGTCGATGACAAAGATGTTATTAATCAAAATCTTACTACCCATGATTGTGTTATCCATTTTGATTGTTGCATGTATAATACTTCGAATGCATAAAAGGAAAAAGGTTGAAAATCAGCTTGAAAGGGGTTTAGCAACTGATTTAGGAGTTTCAAGAAGGATTTCATATTATGAACTTGTGCAAGCAACTAATGGATTTAGTGAGAGTAACTTACTTGGAAAGGGGAGCTTTGGCTCAGTGTATCAGGGAATACTTTCTACAGGGAAGATGGTTGCAATTAAAGTGCTTGACTTGAGTTTGGAAGCAACATCAAGAAGCTTTGAGGCAGAATGCAATGCAATGCGAAATCTCCGACATCGGAATCTTGTTGAGATTATTACTAGTTGTTCAAATAATGATTTCAAATCTTTGGTGATGGAGTTTATGTCAAATGGAAGTGTGGAAAAATGGTTATACTCAGATAATTATTGTTTAGATTTCTTGCAGAGGTTGAATATAATGATAGATGTGGCATCTGCATTGGAGTATCTCCATCATGGTTCTTCAATACCAGTGGTTCATTGTGATTTAAAGCCTAGTAATGTGTTACTGGATACAAATATGGTTGCACATGTCAGTGATTTTGGAATTTCCAAGCTCTTGGATGAAGGGCATTCTAAAACTCATACCGCGACTTTAGCTACTCTCGGCTATGTTGCACCAGAGTATGGATCTAAGGGAGTCATTTCTGTTAAAGGAGATGTGTACAGCTATGGAATAATGCTAATGGAAATCTTCACAAGAAAGAAGCCAACAAATGAAATGTTTGCGGAAGAATTAACCTTAAAAACTTGGATTAGCAAGTCAATGCCTAATTCAATCACCGAAGTTATGGATTGCAATTTAGTCTCACAACATGGGAATGAAACTCATGAAATTTTAGCCCATGTATCATCTATTTTGGATTTAGCATTGAGATGTTGTGCAGATTCACCAGAAGCAAGAATTAGTATGGTAGATGTAACTGCATCATTGATCAAAATTAAGACCTTGTACATCTAG 3276 0.3541 MAKLCSSHSCLYILYVSLHYYFFTCLAMSSNKNITTDEFALLAFKSSITLDPYHMLSNWSISSSSSFSSCNWVGVTCDEHHGRVKALNLSSMGLEGTISPQLGNLSFLVILDLHGNNFHGELPQELLHLKRLKMLDLSYNDFVGEIPRRIGDLSKLQYLDLSYNNIVGFIPQSISNLSLLEYLNWSFNFIEGTIPTIIGQLLRLSILDFKHNKLSGIIPTTISNMSSLEFIYLSNNSLSGEIPFSLFNITSLRVMNFDDNNLNGNLPPEMCDQLPQLKMFTIISNHFEGSIPRSIGNCTSLLILILQDNFFTGLIPMEIGHLNQLQVLQMGNNSLSGFVPSKLFNISTLEYLHLELNSLSGMLPSNMGFDLPNLKELHLYKNKFVGKIPNSISNASNLIIVDLSWNEFSGIIPNTFGNLRFLKSLIIGANTNLTLQDDSLEFNFLTSLTSCTKLTHLEVSGNSLLSKLPKSIGNLSLENFWANSCGISGNIPLEIGNMSNLIRLSLSKNDLSGPIPTTIKGLHKLQSLKLEYNRLQGSITNDLCELRSLSELYLTSNKLFGVLPTCLGNMSSLRNFRIGSNRLTSEIPSSFWNLKDILEVNLSSNALIGNLAPEIKNLRAVVILDLSRNQISSNIPTTISFLKTLQTLSLEYNKLKGSIPTSIGEMVSLSFLDLSQNLIIGVIPKSLESLSSLKYINLSYNGLQGEIPDGGPFEKFTAQSFMHNEALCGSARLEVPPCDDIQIRKKSMTKMLLIKILLPMIVLSILIVACIILRMHKRKKVENQLERGLATDLGVSRRISYYELVQATNGFSESNLLGKGSFGSVYQGILSTGKMVAIKVLDLSLEATSRSFEAECNAMRNLRHRNLVEIITSCSNNDFKSLVMEFMSNGSVEKWLYSDNYCLDFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDTNMVAHVSDFGISKLLDEGHSKTHTATLATLGYVAPEYGSKGVISVKGDVYSYGIMLMEIFTRKKPTNEMFAEELTLKTWISKSMPNSITEVMDCNLVSQHGNETHEILAHVSSILDLALRCCADSPEARISMVDVTASLIKIKTLYI* 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4429 1091 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 13 153 - -
Mal2g4429 1091 Pfam Leucine rich repeat 547 607 IPR001611 GO:0005515
Mal2g4429 1091 Pfam Leucine rich repeat 622 679 IPR001611 GO:0005515
Mal2g4429 1091 Pfam Leucine rich repeat 187 238 IPR001611 GO:0005515
Mal2g4429 1091 SMART serkin_6 811 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g4429 1091 ProSiteProfiles Protein kinase domain profile. 811 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g4429 1091 Pfam Leucine Rich Repeat 155 177 IPR001611 GO:0005515
Mal2g4429 1091 Pfam Leucine Rich Repeat 397 419 IPR001611 GO:0005515
Mal2g4429 1091 Pfam Leucine Rich Repeat 453 475 IPR001611 GO:0005515
Mal2g4429 1091 SUPERFAMILY RNI-like 368 708 - -
Mal2g4429 1091 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 149 271 - -
Mal2g4429 1091 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 188 317 - -
Mal2g4429 1091 Gene3D Transferase(Phosphotransferase) domain 1 887 1089 - -
Mal2g4429 1091 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 135 196 - -
Mal2g4429 1091 Gene3D Phosphorylase Kinase; domain 1 794 886 - -
Mal2g4429 1091 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 149 271 - -
Mal2g4429 1091 SUPERFAMILY L domain-like 49 365 - -
Mal2g4429 1091 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 274 1089 - -
Mal2g4429 1091 Gene3D Ribonuclease Inhibitor 221 431 IPR032675 -
Mal2g4429 1091 Gene3D Ribonuclease Inhibitor 432 746 IPR032675 -
Mal2g4429 1091 ProSitePatterns Protein kinases ATP-binding region signature. 817 839 IPR017441 GO:0005524
Mal2g4429 1091 SMART LRR_typ_2 618 642 IPR003591 -
Mal2g4429 1091 SMART LRR_typ_2 546 569 IPR003591 -
Mal2g4429 1091 SMART LRR_typ_2 371 395 IPR003591 -
Mal2g4429 1091 SMART LRR_typ_2 153 177 IPR003591 -
Mal2g4429 1091 SMART LRR_typ_2 322 346 IPR003591 -
Mal2g4429 1091 SMART LRR_typ_2 666 689 IPR003591 -
Mal2g4429 1091 SMART LRR_typ_2 396 418 IPR003591 -
Mal2g4429 1091 SMART LRR_typ_2 570 593 IPR003591 -
Mal2g4429 1091 SMART LRR_typ_2 105 129 IPR003591 -
Mal2g4429 1091 SMART LRR_typ_2 201 224 IPR003591 -
Mal2g4429 1091 SMART LRR_typ_2 225 249 IPR003591 -
Mal2g4429 1091 SMART LRR_typ_2 690 714 IPR003591 -
Mal2g4429 1091 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 135 196 - -
Mal2g4429 1091 Gene3D Ribonuclease Inhibitor 36 150 IPR032675 -
Mal2g4429 1091 SUPERFAMILY Protein kinase-like (PK-like) 795 1083 IPR011009 -
Mal2g4429 1091 Pfam Protein kinase domain 812 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g4429 1091 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Mal2g4429 1091 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 13 153 - -
Mal2g4429 1091 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 188 317 - -
Mal2g4429 1091 Gene3D Ribonuclease Inhibitor 151 220 IPR032675 -
Mal2g4429 1091 SMART LRR_sd22_2 322 348 - -
Mal2g4429 1091 SMART LRR_sd22_2 666 692 - -
Mal2g4429 1091 SMART LRR_sd22_2 618 637 - -
Mal2g4429 1091 SMART LRR_sd22_2 153 179 - -
Mal2g4429 1091 SMART LRR_sd22_2 451 477 - -
Mal2g4429 1091 SMART LRR_sd22_2 371 397 - -
Mal2g4429 1091 SMART LRR_sd22_2 498 524 - -
Mal2g4429 1091 SMART LRR_sd22_2 201 227 - -
Mal2g4429 1091 SMART LRR_sd22_2 546 572 - -
Mal2g4429 1091 ProSitePatterns Serine/Threonine protein kinases active-site signature. 930 942 IPR008271 GO:0004672|GO:0006468
Mal2g4429 1091 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 274 1089 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4429 Mal-Chr2 89421920 89435848 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4429 487 711 Receptor kinase-like Gene Family AT3G47570 31.278 2.17e-21 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal2g4429 Pkinase 4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4429 - K13420 mtr:MTR_6g040210 1255.35