Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4422 ATGGTACTCATGGACGAAGGTGGAGATAGAATCCATGCTTCTGTTAAGAGAACTTTGATTTATAAATTTAAGAATGATCTTATTGAAGGAAAGTCCTACTCTTTTGAAAATCTTGGTGTCGCAAAAAATGGTGGGAGTTACCGCACCACAAGACATGCTTACAAACTGAATTTTCAGTTCAACAGTAAAGTGCAGTTGCTCTCAAATCTCACTATCACAAAGTCCCCTTACTGTTTTGTACCAATAGCTGAGATCATTGGTGGTTCTTTTGATATTGATTATCTTCCCGATGTGATTGGAGTTCTCACATGCGTAGGCAATGAAAGAGAAATTCAAAGCAATGGTTCAACCACAAAGCTAAACGTGATTTCTTTGGAATCAGATGGGCATAAAGTGCAATGCACTTTGTTTGGCAATTACGTTGATGAGTTGAACAACTTTCTTGCAAGTGGGGATGTACAGAATGTTGTGGTTATTATTCAGCTTGCAAAAGCCAAGTCTTTCCAAGCCAACATTCACATCCAAAATTGCATGGCATGTACTCGGTTGGTTTTCAACCCAACCTGTGCTGATGGGATAGCCATGAGGAATAGGATATCTGAAAATGTGGATGTTGCTTCACCCCTGAGTTTAACCCAGTTGAATCCAGAACCTAGAGTACAACCAATGGAGGAGTTCATGTACCATACTCAAAGGAGAACTTTGCAGGGTCTTAAGGATTCCACATCTGACTCTCTGTTTGTTGTTCTTGCCACTATTACGGGAATTCTGAATTCTGAAAATTTTTGCTGCACTGCATGCTCATGTGGCAAATCAGTCATACCAGATTCTGAGATGTTTTTCTGTGAAAAGTGTGATAAACATGTTACTAAAGTGTTCCCTAGGTTTCTTATTAAGTTGAGAGTGATTGACTTCTCTGATAGTGCAACTATCGTAATGTTTGACATAGAGGCTTGTGCCCTGCTCAACAAAAGTTGTGCTGCTGTTATTCAAGAACATAATGGGGTAGCTGCTGGAGAGCCTGCTGCATTGGCTGGATTAGTGAACAGGACATTATTGTTTAAGGTTCAAACAAAGGCTGATTTTAATAGAAGATTTGAACAGTCTTTCCGGGTTAGGAAGATTTGCGTTGATCCGGAGGTCATCACTGAATTTAGGAAGAAATGGGATAAGGAGGAGGCTGTTTTCAACAAATCTGCAAATGAGAATTCTTCGCTAAGTGCGTTGAAGGATAAGGGTAAACAACCCTTGCTTATAGAATTTGGATCTGCTGATGTGCTTGAAGAGGATGTTATATGTCTGTCTGAACCTGAACCTGTTGGGAAGGGAAAAGAGTTGGTAATTTCTGTTGCAGAGACATCTAGAATTTCACAGGACCTATTGTCCAAGTTTGGGACTACTGCTGCACAGATTGAGACTGGTCATGCTCATGTTGGTTCTTCTGCCAAAAGGGTTTCTCCTACAAAGGATGATGATGAGGACTCTGAAGATGAAAACATCCCTATCAAGTTATTGAGGAAGAGTGTTAAAATTGAAAAACTTTAA 1545 0.3994 MVLMDEGGDRIHASVKRTLIYKFKNDLIEGKSYSFENLGVAKNGGSYRTTRHAYKLNFQFNSKVQLLSNLTITKSPYCFVPIAEIIGGSFDIDYLPDVIGVLTCVGNEREIQSNGSTTKLNVISLESDGHKVQCTLFGNYVDELNNFLASGDVQNVVVIIQLAKAKSFQANIHIQNCMACTRLVFNPTCADGIAMRNRISENVDVASPLSLTQLNPEPRVQPMEEFMYHTQRRTLQGLKDSTSDSLFVVLATITGILNSENFCCTACSCGKSVIPDSEMFFCEKCDKHVTKVFPRFLIKLRVIDFSDSATIVMFDIEACALLNKSCAAVIQEHNGVAAGEPAALAGLVNRTLLFKVQTKADFNRRFEQSFRVRKICVDPEVITEFRKKWDKEEAVFNKSANENSSLSALKDKGKQPLLIEFGSADVLEEDVICLSEPEPVGKGKELVISVAETSRISQDLLSKFGTTAAQIETGHAHVGSSAKRVSPTKDDDEDSEDENIPIKLLRKSVKIEKL* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4422 514 MobiDBLite consensus disorder prediction 472 499 - -
Mal2g4422 514 Gene3D - 72 207 IPR012340 -
Mal2g4422 514 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 1 330 - -
Mal2g4422 514 Pfam Replication factor-A C terminal domain 248 362 IPR013955 -
Mal2g4422 514 CDD RPA1_DBD_C 247 375 IPR013955 -
Mal2g4422 514 SUPERFAMILY Nucleic acid-binding proteins 1 69 IPR012340 -
Mal2g4422 514 CDD RPA1_DBD_B_like 97 191 - -
Mal2g4422 514 Pfam Domain of unknown function DUF223 1 93 IPR003871 -
Mal2g4422 514 PANTHER REPLICATION FACTOR A 1, RFA1 1 330 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal2g4422 514 SUPERFAMILY Nucleic acid-binding proteins 232 375 IPR012340 -
Mal2g4422 514 CDD RPA1_DBD_A_like 1 64 - -
Mal2g4422 514 Gene3D - 1 69 IPR012340 -
Mal2g4422 514 Gene3D - 223 381 IPR012340 -
Mal2g4422 514 SUPERFAMILY Nucleic acid-binding proteins 77 201 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4422 Mal-Chr2 89047053 89050235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4422 3 314 Core DNA Replication Machinery Family AT4G19130 21.084 2.00e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4422 - - mtr:MTR_4g036240 534.258