Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4403 ATGTCTCCCAGTTTCTATACCCTACCCTTATTGTCCTTACTTTTGTTCACTTTCCCTTCTAATTCAATTCACTTCCAAATTTCCAGTTTTAAGCCTAGTGATACCAACATAGTCTACCAAGGTTCTGCAGCACCAATTAATGGAGAAGTTGATTTCAACATCAACAAAGCATATGCACGTCAAGTTGGAAGAGCAATCTATGCCAAAAGGGTGTTGCTTTGGGATTCAAAAACAGGTCAACTCACTGATTTCAAAACTCATTTCACATTCATTATTGACACTAATAATCTTAGATCTGGTGATGGACTTGCCTTCTTTCTTGCTCCTTTTGGAATTGAAATCCCACCCAATTCTTCAGGTGGATTTTTGGGCTTATTTAACACAACAACGATGAGTTCAACTGATAATCAAATTTTTCATGTGGAGTTCGATACTTTCCCAAATGATGAATTGCGTGAGACCATAGGGCATGTAGGAATTAATAAAAACTCAATTTTTTCGTCAACTGCTGAGATATGGATTAGCTACAATTCTACAACAAAGAATTTGACTGTATCTTGGAAGTATCAAACTACCTCTAATCCTCAGGAAAAAACTAGTCTTTCATATCAAATTGATTTAATGAAGGTCCTTCCTGAATGGGTTGCTGTTGGATTTTCTGCTGCAGCAGGTGCTTTAGGAGAAAGACATAGTCTTTTGTCTTGGGAATTCAACTCCACTTTGGATCAAAGTGATGATGATGATGATAATAATTCAAAAAAGAAAACATTAGTTGTATTACTAACAATTTCTTGTGGGGTTATAGTTGTAAGCGTGGGAGCATTAGTAGTATATGCATTACTTTGGAGGAAAAGAAAAAGAAGTAAAAAGCAAAAGGAAGAGGCTATAAATGTAACCTCGATGAATTATGACCTTGAAAAAGGAGTAGGTCCAAGGAGGTTCACCTATAAAGAACTTGATTTGGCTACCAACAACTTCTCTAGCAAAAGAAAGTTAGGCCAAGGTGGTTTTGGAGCTGTTTATAAAGGTTATTTTTTTGATTTAGATTTATTAGTTGCTGTGAAGAAAATATCGAAGGGATCAAGACAAGGTAAGAAAGAGTATGTAACTGAAGTAAAAGTTATTAGCCAGCTGAGACATAGGAATCTTGTGAAGTTGTTAGGTTGGTGCCATGACAAAGGTAAGTTTCTACTTGTTTATGAGTTTCTGCCAAATAGTAGCCTTGATTCTCATTTATTCGGTAAAAGGACACATCTTTCTTGGAGTTCAAGGCACAAAATAGCTCTTGGCTTGGCCTCTAGTGTGCTTTATTTACATGAAGAATCGGAGAGATGTGTGGTACATAAGGATATCAAATCAAGTAATGTTATGTTAGATTCTAATTTCAATGTCAAACTTGGTGACTTTGGGTTGGCTAAGTTAATGGACCATGAGATTGGGCCCCAAACAACGGGGATTGCTGGAACCTTAGGCTATTTGGCTCCAGAATATATAAGTACAGGTAAGGCCAGCAAAGAGTCTGATGTCTATAGTTTTGGGGTCGTAGCCTTGGAGATAACTACTGGAAGGAAAGCTGTTGAAATTATGATGGACAATGATGGTGAGAAGGGATTGATTGAGTGGGTGTGGGATCATTATGGAAGAGGAAAACTACTTGTGACCGTGGATGAGAATTTGAAAAAAGATTTTGATGAGAAACAAGTAGAGTGTTTGATGATTGTTGGATTGTGGTGTGCTCATCCTGATGTAAGTCTAAGGCCATCAATTAGACAAGCAATTCAAATGCTTAATTTTGAGGTTACCTTGCCAAATCTACCACTAAAGAGACCTGTTGCAACCTATCATTCTCCCATACCGTTCGTAAGCTCAATAGGAACTTCCATAACCACAAGCCTTCAAGAAGGTCGTTAA 1911 0.3741 MSPSFYTLPLLSLLLFTFPSNSIHFQISSFKPSDTNIVYQGSAAPINGEVDFNINKAYARQVGRAIYAKRVLLWDSKTGQLTDFKTHFTFIIDTNNLRSGDGLAFFLAPFGIEIPPNSSGGFLGLFNTTTMSSTDNQIFHVEFDTFPNDELRETIGHVGINKNSIFSSTAEIWISYNSTTKNLTVSWKYQTTSNPQEKTSLSYQIDLMKVLPEWVAVGFSAAAGALGERHSLLSWEFNSTLDQSDDDDDNNSKKKTLVVLLTISCGVIVVSVGALVVYALLWRKRKRSKKQKEEAINVTSMNYDLEKGVGPRRFTYKELDLATNNFSSKRKLGQGGFGAVYKGYFFDLDLLVAVKKISKGSRQGKKEYVTEVKVISQLRHRNLVKLLGWCHDKGKFLLVYEFLPNSSLDSHLFGKRTHLSWSSRHKIALGLASSVLYLHEESERCVVHKDIKSSNVMLDSNFNVKLGDFGLAKLMDHEIGPQTTGIAGTLGYLAPEYISTGKASKESDVYSFGVVALEITTGRKAVEIMMDNDGEKGLIEWVWDHYGRGKLLVTVDENLKKDFDEKQVECLMIVGLWCAHPDVSLRPSIRQAIQMLNFEVTLPNLPLKRPVATYHSPIPFVSSIGTSITTSLQEGR* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4403 636 SMART serkin_6 326 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g4403 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Mal2g4403 636 Gene3D Transferase(Phosphotransferase) domain 1 403 618 - -
Mal2g4403 636 ProSiteProfiles Protein kinase domain profile. 326 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g4403 636 CDD lectin_legume_LecRK_Arcelin_ConA 23 241 IPR001220 GO:0030246
Mal2g4403 636 CDD STKc_IRAK 332 597 - -
Mal2g4403 636 Pfam Legume lectin domain 23 251 IPR001220 GO:0030246
Mal2g4403 636 Gene3D - 20 256 - -
Mal2g4403 636 ProSitePatterns Legume lectins alpha-chain signature. 211 220 IPR000985 -
Mal2g4403 636 Gene3D Phosphorylase Kinase; domain 1 311 402 - -
Mal2g4403 636 SUPERFAMILY Protein kinase-like (PK-like) 310 619 IPR011009 -
Mal2g4403 636 PANTHER PUTATIVE-RELATED 20 631 - -
Mal2g4403 636 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 247 IPR013320 -
Mal2g4403 636 ProSitePatterns Protein kinases ATP-binding region signature. 332 356 IPR017441 GO:0005524
Mal2g4403 636 Pfam Protein kinase domain 327 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g4403 636 PANTHER - 20 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4403 Mal-Chr2 88093219 88095168 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4403 12 615 Receptor kinase-like Gene Family AT5G10530 55.485 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mal2g4403 Pkinase 6.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4403 - - mtr:MTR_8g067690 909.057