Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4399 ATGAAGAATTATATTTCTAAGAGAAGTGGTGTAAGAAAATACCACAAATCAGAACAACCACGTCTTAGATGGACACCTGAACTTCATCAATATTTTGTTCAAACTGTTGAAAGTCTTGGTGGAAAACATAAGGCAAGTCCAAAGCACATTTTGAATATGATGCAAGTGAAGGGTTTGAGAATCTCTCACATTAAAAGTCATCTTCAGATGTACAGGAACGTGAAGGGACAGACGATTCTTGCACCACTAGAAGAAAATGCACAGCTCAATCATCTCCCAATATGTTCCAGTTGTTCACCCCAAAGATCGAGAAATATCAATCAAGAACTTCAGCCATTACACAATAAAGGACTTTCAAAAGCAAGTGAAACTGATTATTATGATCTAAATCAGGAGCCTGAGTCAAGTGCATGCAATCTTAGTGATATGTCAAATGAAGAAGGAAATTACATAAATGGCAAATATCTAAATCTCCCATTCTCTTTCAGTTCTCTGTTAATTCCAGTGGTGCATAATGATCAAGGCAGAACACTTTTTTCTTCACCAAATACAACAGATAATCACGTTTTAGAGTCTAGTTCCATAAAATCTCATGGGAGAGATTATATAAACTTGGACCTTTCAATTTGA 630 0.3571 MKNYISKRSGVRKYHKSEQPRLRWTPELHQYFVQTVESLGGKHKASPKHILNMMQVKGLRISHIKSHLQMYRNVKGQTILAPLEENAQLNHLPICSSCSPQRSRNINQELQPLHNKGLSKASETDYYDLNQEPESSACNLSDMSNEEGNYINGKYLNLPFSFSSLLIPVVHNDQGRTLFSSPNTTDNHVLESSSIKSHGRDYINLDLSI* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4399 209 Gene3D - 19 76 - -
Mal2g4399 209 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 10 118 IPR044848 GO:0003700
Mal2g4399 209 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 76 IPR017930 -
Mal2g4399 209 SUPERFAMILY Homeodomain-like 18 73 IPR009057 -
Mal2g4399 209 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 73 IPR006447 GO:0003677
Mal2g4399 209 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 10 118 - -
Mal2g4399 209 Pfam Myb-like DNA-binding domain 22 72 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4399 Mal-Chr2 87961188 87968743 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4399 10 75 G2-like Transcription Factor Family AT1G14600 63.636 4.86e-24 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal2g4399 Myb_DNA-binding 2.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4399 - - gmx:100791958 264.233