Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4397 ATGAACCATGGTTTCTCTGAATCACAATTATGTAAATATGTAAAGAAACACCCTTTAGTGCTTTTATCAGATCCTAAAAAGACCTTTTTGCCTAAACTCAACTTCTTGCATTCTATTGGGGTTTCAACCTCTGATTTCCCCAAAATCTTAAATTGGAACACTTCCTTTTTGACAGCAAGTTTGAAGAAAAAACTAATACCTCGTTATCAGATTCTTCGGAGCCTAGTTTGCAACGATAAACAGGTTGTTTCAACTTTCAAGAATTGGTCAAGGAACATTTACAATGATTCAATGGTTAATGATTCTGTTCCAAACATTGAGGTTTTGAGGAAGCTTGGTGTGCCTCAACGTTTCATTTCCCTTTTGGTATCCAATTATCCTTCTGTAGCATTCACCAAGCATACTAGATTTGTTGAGGCTGTTAATTCAGTCAAGGAAATGGGGTTTGATTAG 453 0.3598 MNHGFSESQLCKYVKKHPLVLLSDPKKTFLPKLNFLHSIGVSTSDFPKILNWNTSFLTASLKKKLIPRYQILRSLVCNDKQVVSTFKNWSRNIYNDSMVNDSVPNIEVLRKLGVPQRFISLLVSNYPSVAFTKHTRFVEAVNSVKEMGFD* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4397 150 Pfam mTERF 2 150 IPR003690 GO:0003690|GO:0006355
Mal2g4397 150 Gene3D Transcription termination factor 3, mitochondrial 1 150 IPR038538 -
Mal2g4397 150 PANTHER CGI-12 PROTEIN-RELATED 2 150 IPR003690 GO:0003690|GO:0006355
Mal2g4397 150 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 2 150 - -
Mal2g4397 150 SMART mt_12 47 78 IPR003690 GO:0003690|GO:0006355
Mal2g4397 150 SMART mt_12 11 42 IPR003690 GO:0003690|GO:0006355
Mal2g4397 150 SMART mt_12 120 150 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4397 Mal-Chr2 87881456 87881908 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal2g4397 mTERF 2.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4397 K15032 - gmx:106799612 172.94