Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4396 ATGTATCATTTTCTCATTTCTAGATTCACCCATAGGACCTTTCATTCTAATGTTCTAGATTCTCTTTACTTCAATTCTCGTTATTTCTCTCTTGTTTCCAACACAAATCACCATGCTGACTCTTTAACGTTATCAACCCTCGTTAACTCATGTGGATTGTGCCCTGAAACAGCTCTTAAACTCTCCCAAAGGTTGAAAACAAAAAAACCTGATGGCCCAAATGCTGTAATTCAACTTCTCAGAACCTATGGTTTCTCTGATTCCCAGTTATCAAGAATTGTTAAGAAACACCCTTTTGTACTTTTATCAAAACCTGAAAAGACCATTTTGCCTAAACTCAAGTTCTTCCGTTCCATTGGGTTTTCAAACTCTGATCTCCCCAAAATCTTAATTAGGAACACTTGTCTTTTAATAACAAGCTTGGAGAAAAATATTATCCCTCGTTATGAGATTCTTAGGAGTCTAATTCGCAATGATGACAAAGTGGTTTACACTATCAAGCGTGCGTCATGGACCTTCCACGGTGATTCCATGTTTAATGATTCCGTTCCAAACATTGAGGTTTTGAGGAAGCTTGGTGTGCCTCAACGTTTCATTTCCCATTTGGTATCCACTTATCCTGCTGTAGCATTCACGAATAATTCCAGATTTGTTCAGGCTGTTAATTTAGTTAAGGAAATGGAGTTCGATCCTTCCAAGAGTTATTTTGTTTCGGCACTTCGAGTAATTGTAAGTATGGACAATTGGGAATCAAAATTTAAGATTTTTGAGAAGTGGGGCTGGTCGAGAGATATATGTCTTTTGGTTTTCAAAAAGTGTCCTCAATATTTGTTGATCTCAGAAAAAACGATTATGAAAACAATGAACTTCTTGGTGAATGATGTCGGTCTTACACCAGAAGACATTGTTAGATGCCCTGTGATTCTGAAACGTAACTTGGAGAAGATACTTGTCCCCAGATGTGGAGTTGTTAAGATTTTGAAGTCAAGGGGTTTGATAAAGAGTGGTTTGCGCTTAAGTAGCTTTGTTTTGTTAAGTGAGGAAAAGTTTCGGGAGAGATATGTTACTCCATTTGAGAAAGAATTGCCATTGTTATTGGATGCATATAAAGCTCAGAAGTCAGATTGA 1128 0.3723 MYHFLISRFTHRTFHSNVLDSLYFNSRYFSLVSNTNHHADSLTLSTLVNSCGLCPETALKLSQRLKTKKPDGPNAVIQLLRTYGFSDSQLSRIVKKHPFVLLSKPEKTILPKLKFFRSIGFSNSDLPKILIRNTCLLITSLEKNIIPRYEILRSLIRNDDKVVYTIKRASWTFHGDSMFNDSVPNIEVLRKLGVPQRFISHLVSTYPAVAFTNNSRFVQAVNLVKEMEFDPSKSYFVSALRVIVSMDNWESKFKIFEKWGWSRDICLLVFKKCPQYLLISEKTIMKTMNFLVNDVGLTPEDIVRCPVILKRNLEKILVPRCGVVKILKSRGLIKSGLRLSSFVLLSEEKFRERYVTPFEKELPLLLDAYKAQKSD* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4396 375 Pfam mTERF 77 230 IPR003690 GO:0003690|GO:0006355
Mal2g4396 375 Pfam mTERF 243 350 IPR003690 GO:0003690|GO:0006355
Mal2g4396 375 PANTHER CGI-12 PROTEIN-RELATED 32 372 IPR003690 GO:0003690|GO:0006355
Mal2g4396 375 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 32 372 - -
Mal2g4396 375 SMART mt_12 127 158 IPR003690 GO:0003690|GO:0006355
Mal2g4396 375 SMART mt_12 91 122 IPR003690 GO:0003690|GO:0006355
Mal2g4396 375 SMART mt_12 234 262 IPR003690 GO:0003690|GO:0006355
Mal2g4396 375 SMART mt_12 200 230 IPR003690 GO:0003690|GO:0006355
Mal2g4396 375 SMART mt_12 299 333 IPR003690 GO:0003690|GO:0006355
Mal2g4396 375 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Mal2g4396 375 Gene3D Transcription termination factor 3, mitochondrial 179 362 IPR038538 -
Mal2g4396 375 Gene3D Transcription termination factor 3, mitochondrial 54 178 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4396 Mal-Chr2 87873739 87874866 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal2g4396 mTERF 2.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4396 K15032 - gmx:106799612 406.371