Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4390 ATGTATCCTTTTCTCATTTCTAGATTCACTCATAGTCATAGAACCCTTCACTCTACAAATGTTCTATGCCGCAATGTTTTTTCTCTGTTATTCAATTTTCGTTCTTTCTCTCTTGTTTCCAGTGACAACTTTACAGTGTCAAACCTCGTAAACTCATCTGGTTTGTCCCCTGAAATAGCTCTTAAACTCTCCAAAAGGTTGAAAATCACAAACCCTGATGCCCCAAATGCTGTTATTCAACTTCTCATGAACCATGGTTTCTCTGAATCACAATTATGTAAATATATAAAGAAACACCCTTTAGTGCTTTTAGCAAACCCTGAAAAGACCCTTTTGCCTAAACTCAAATTTTTGCAATCCATTGGGGTTTCAACCACTGATCTCCCCAAAATCCTAATTAGGAACACTAATTTTTTGTCAAAAAGCTTGGACAAAACCCTTATCCCTCGTTATGAGGTCCTTAGGAGTCTAGTTCGCAACGATAAAGAGGTAGTTTCAGCTTTGAAGCATGGAACATGGGGCTTACACAATGGTTGGGTTATAAATGATGCAGTTCAGAATATTGAGGCTTTGAGGAATCTTGGTGTGCCTCAAGGTTGCATTTCCCTTTTGGTATCTAATTTTCCCAGTGTAGCATTCGCCAGGCATTCTAGATTTGTTGAGGCTGTTAATTCAGTCAAGGAAATGGGGTTTGATCCTTCAAAGTCTTATTTTGTTTTGGCACTTCAAGTAATTGCAAAGATGGACAAAGAGACTTGGGAATCAAAATTGAAGATTTTTGAGAGGTTGGGTTGGTCGAGAGATATCTGTCTTTTGGCTTTCCAAAAATATCCTCAGTATATTATGATCTCAGAAAAAAAGATTATGAAAACAATGAACTTCTTGGTGAATGATGTTGGTCTTACACAAGAAGACATTGCCAGAAGGCCCGGGATTCTGAACCGTAACTTGGAGAAGAGGCTTATACCTAGATGGGCTGTTCTTAAAATTTTAAAGTCAAAGGGTTTGGTAAAGAGTGACTTTCGCATAACTAGCGTTATTTCGGTTAGTGAGAAAATGTTTTTGGAGAGATATGTGACCCGATTTAAAAAAGACGCACTTCTGTTATTGGATGCATATAAAGTTTGGTCTAAGTCCATTGTCTTTCCTCTATAA 1155 0.3766 MYPFLISRFTHSHRTLHSTNVLCRNVFSLLFNFRSFSLVSSDNFTVSNLVNSSGLSPEIALKLSKRLKITNPDAPNAVIQLLMNHGFSESQLCKYIKKHPLVLLANPEKTLLPKLKFLQSIGVSTTDLPKILIRNTNFLSKSLDKTLIPRYEVLRSLVRNDKEVVSALKHGTWGLHNGWVINDAVQNIEALRNLGVPQGCISLLVSNFPSVAFARHSRFVEAVNSVKEMGFDPSKSYFVLALQVIAKMDKETWESKLKIFERLGWSRDICLLAFQKYPQYIMISEKKIMKTMNFLVNDVGLTQEDIARRPGILNRNLEKRLIPRWAVLKILKSKGLVKSDFRITSVISVSEKMFLERYVTRFKKDALLLLDAYKVWSKSIVFPL* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4390 384 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 36 374 - -
Mal2g4390 384 Gene3D Transcription termination factor 3, mitochondrial 56 177 IPR038538 -
Mal2g4390 384 Gene3D Transcription termination factor 3, mitochondrial 178 365 IPR038538 -
Mal2g4390 384 SMART mt_12 303 337 IPR003690 GO:0003690|GO:0006355
Mal2g4390 384 SMART mt_12 93 124 IPR003690 GO:0003690|GO:0006355
Mal2g4390 384 SMART mt_12 236 266 IPR003690 GO:0003690|GO:0006355
Mal2g4390 384 SMART mt_12 271 302 IPR003690 GO:0003690|GO:0006355
Mal2g4390 384 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Mal2g4390 384 SMART mt_12 202 232 IPR003690 GO:0003690|GO:0006355
Mal2g4390 384 Pfam mTERF 247 355 IPR003690 GO:0003690|GO:0006355
Mal2g4390 384 Pfam mTERF 79 307 IPR003690 GO:0003690|GO:0006355
Mal2g4390 384 PANTHER CGI-12 PROTEIN-RELATED 36 374 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4390 Mal-Chr2 87672008 87676101 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal2g4390 mTERF 2.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4390 K15032 - gmx:106799612 428.713