Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4374 ATGTGTGATTTTTTTTATAGAGAATGGAAACCAAAATTGAAAATGATTTTTGATAGTGTTGAAGATGCTTGGAAATTTTGGGTAGATTATGGTGGAAAAGTTGGATTTGGAGTAAGGAAACAATATTCACACAAGAACAGAAATGGTGTGATTTCTTCTTACATGTTTGTTTGTTGTAAAAAAGGTTTGAGAAAAGCTGATAAACGAGATTATAAAACAATCAATCCAAGACTGGAGACCAGAACAAAATGTCCAGTAAAGTTAGGAATTAAGAATGTCAATGGAAAATATATGGTGGTTGATTTTGTGGAGGTACACAATCATATTTTACATAGACCAGAAACAGTTCATATGCTGCCATGTCAGAGGAAAGTCTCTCAAATTCAATGTCAACAAATTGATCTAGCAGATGATGCAGGATTACAACAAAGGAAGTCATTTGACTTGATGAGTAAAGAAGTGGGAGGTCGAACTAACTTGGGATTTACTCGTATTGATCAAAAAAATTATCTTCGGAGAAAAAGACAAAGGAGTATGGAACATGGAGAAGCTGGTTATTTATTGCAAATCTTCCATAGAAAGTCGATGGAAAATCCAACTTTCTATCATGCATATCAAATGGATGCTGAAGAACAAATCACCAATGTGTTCTGGGCAGATGCAATGATGCTAATTGATTATGAGTATTTTGGTGATGTGATTTCTCTTGATTCAACATATTGCACAAATAGTTCACATAGACCACTTGCAGTGTTCTCGGGATTTAACCACCATCGAAAAGCAGTGATTTTTGGGGCAGCATTATTATATGATGAAACAAAAGAGTCATACAAGTGGCTCTTTGAGACCTTTTTAGAGGCTCATAAGCAAAAAATGCCCCAAACAATTTTTACTGATCAACACCAGGCAATGGCAGGAGGACTAGTTGAGGTTATGCCTAGAGCTTACCATGGATTATGTACATGGCACTTGATGCAAAACTGCATCAAGCACTTAGGAAATTTGATGAAAGGTGGGTCTCATTTTCTTAGTGACTTTAAGAAGTGCATGTATGAATATGAAAATGAAGACCAATTTGAAGAAGGTTGGAAAGCTCTCTATGAAAAATATGATGTCAATGATAAAACTTGGTTGCAAAGAGTGTATAGTATAAAGAAGAAATGGGCATCATGTTACATGAAGAAAGTTTTTACATTAGGAATGCGAAGCACTCAACTTAGTGAAAGTTTGAATGCAGGTATTAAGAGCATTATGAATGTGAACTTGGGTATAATCAATTTTTTCAAGCGCTTTGAGGATGTTGTAGAGGAAAAGCGATATAATGAATTGAAGTGTGAATATGAAGCACGACAAAAGATTCCAAGACTATGGAACCCATATTCAAATATCTTGCAACAAGTATCTGAGCTTTACACTCCCACTGTTTTTGATCAATTCCAACATGAGTATCAGTTGTTTGAAGCATGTTTAGTGAAAAGCATGAATGTACAACCACCCTTAATTGATTGTCGAGTGTCATTTGATTTGAATAAGAATTCAATTTCTTGCTCTTGTCTTAAGTTTGAGAGTTTTGGCATACTTTTTTGTCATTGTCTAAAAGTGTTTATTCATATGGATGTCAAATCAATTCCAGAACATTATATCTTAAAAAGATGGACAAAGTCAGCTAGAAGTGAGACTTTACCTGATGTTGGTGTGAGTTATGTGGTAGAAGATGTTGATTTATCCCCAGCACAACGCTACAGGGAGATTTGCCCCCGCCTTATAAGGATAGCCAATGAAGCATGTAGAAATCCAGAAACATTCACATTCCTGTGCAAAGTTGTTAATGAATTGAGTAGGCACATGCAAGAGTTTCAAAACAATGCAGTAAATGTTTCTCAAGTGAATGAGCTTGCTAGTAGCAATGATGGTTTGTTACAAGCAAAGGGATTCAAAAATAGAGAAGGAAAAAGGACTTCAAAACGTGGGAAAGGCTGGGTAGAGTGCCAACCTGACAAAAGAAAGAAAAGTAATGTCTCTAAAGCTTCACACATTCAGAAGAATAAAGCGCGTGCAAAGGATCAACTTGTCAGCAAAGAAAAAGATGATGACATGGGTGATTCACAAACACAAGTCCATTATGAAATTTCCAATTCAGGTGCATCTATTTGTCTCAATGATTTATACAATATACAATCCATGGAAAATAGTAACACTTTAAGTCAATTTGGCGTCAATAGTTTTACTAGATTATTGATGCTATGCCAAGTGAAAAAAAAAATTAATTAA 2271 0.3514 MCDFFYREWKPKLKMIFDSVEDAWKFWVDYGGKVGFGVRKQYSHKNRNGVISSYMFVCCKKGLRKADKRDYKTINPRLETRTKCPVKLGIKNVNGKYMVVDFVEVHNHILHRPETVHMLPCQRKVSQIQCQQIDLADDAGLQQRKSFDLMSKEVGGRTNLGFTRIDQKNYLRRKRQRSMEHGEAGYLLQIFHRKSMENPTFYHAYQMDAEEQITNVFWADAMMLIDYEYFGDVISLDSTYCTNSSHRPLAVFSGFNHHRKAVIFGAALLYDETKESYKWLFETFLEAHKQKMPQTIFTDQHQAMAGGLVEVMPRAYHGLCTWHLMQNCIKHLGNLMKGGSHFLSDFKKCMYEYENEDQFEEGWKALYEKYDVNDKTWLQRVYSIKKKWASCYMKKVFTLGMRSTQLSESLNAGIKSIMNVNLGIINFFKRFEDVVEEKRYNELKCEYEARQKIPRLWNPYSNILQQVSELYTPTVFDQFQHEYQLFEACLVKSMNVQPPLIDCRVSFDLNKNSISCSCLKFESFGILFCHCLKVFIHMDVKSIPEHYILKRWTKSARSETLPDVGVSYVVEDVDLSPAQRYREICPRLIRIANEACRNPETFTFLCKVVNELSRHMQEFQNNAVNVSQVNELASSNDGLLQAKGFKNREGKRTSKRGKGWVECQPDKRKKSNVSKASHIQKNKARAKDQLVSKEKDDDMGDSQTQVHYEISNSGASICLNDLYNIQSMENSNTLSQFGVNSFTRLLMLCQVKKKIN* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4374 756 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 6 625 IPR031052 GO:0006355
Mal2g4374 756 Pfam FAR1 DNA-binding domain 25 110 IPR004330 -
Mal2g4374 756 MobiDBLite consensus disorder prediction 647 673 - -
Mal2g4374 756 MobiDBLite consensus disorder prediction 681 702 - -
Mal2g4374 756 SMART 26again6 514 541 IPR006564 GO:0008270
Mal2g4374 756 Pfam MULE transposase domain 233 327 IPR018289 -
Mal2g4374 756 MobiDBLite consensus disorder prediction 647 702 - -
Mal2g4374 756 PANTHER OS03G0181600 PROTEIN 6 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4374 Mal-Chr2 86911014 86915824 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal2g4374 MULE 2.4e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4374 - - ccaj:109815076 918.687