Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4344 ATGGAGAATAACTACTCCATGTTGTTTCCTTGTCCTCCTTCTTCAAGCTATCCAATTCCAACAAGTGGTTTTAATGGTCAAAGCTCAAATGCATTTCTTGATTTGAAGCCTATTAAACATGATGAAGATGTGAATGGAGAAGAAGGGAGTGTTAATGTTATGATGGATCAACAAGGTGCTAAAAAGAAAGGGGAGAAAAAAGCTAAGAAGCCTAAATATGCTTTTCAAACTAGGAGTCAAGTTGATATACTTGATGATGGTTATAGATGGAGGAAATATGGTCAAAAAGCTGTTAAAAACAACAAATTTCCCAGGAGCTACTATAGGTGCACACATCAAGGGTGCAATGTAAAGAAACAAGTTCAACGCTTAACCAAAGACGAGGGAGTAGTGGTGACCACATATGAAGGAGTGCATACTCACCCTATCGAGAAGACGACCGATAACTTTGAGCATATTTTGAGTCAGATGCAAATATACACTCCCTTCTAA 492 0.3801 MENNYSMLFPCPPSSSYPIPTSGFNGQSSNAFLDLKPIKHDEDVNGEEGSVNVMMDQQGAKKKGEKKAKKPKYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4344 163 Pfam WRKY DNA -binding domain 85 142 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal2g4344 163 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 36 159 IPR044810 GO:0003700
Mal2g4344 163 ProSiteProfiles WRKY domain profile. 79 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal2g4344 163 SUPERFAMILY WRKY DNA-binding domain 76 143 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal2g4344 163 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 36 159 - -
Mal2g4344 163 SMART WRKY_cls 84 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal2g4344 163 Gene3D WRKY domain 69 143 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4344 Mal-Chr2 85288202 85289724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4344 25 163 WRKY Transcription Factor Family AT5G13080 68.571 9.81e-60 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal2g4344 WRKY 1.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4344 - - ccaj:109792402 246.899