Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4323 ATGGAGTTGGATGATAATGAAGTCGATTCACCCTCACCGTCAAAAGACTTCAATGATCTAGAAAATACGTTGGTGGAATGGATTCCTGCGTGCGATGACGAACTCAAACCTGTGATTGGTAAGGTGTTTGATACTTTAATAGACGGAGCTGATTTCTATAAAACTTATGCTCATGCCGGTGGTTTTAGTGTGCGTAATTCGACTGAAACAAAAGATAATGTTGGTGTCAAATGGAAATATTTTCTTTGCTCAAAAGAGGGTTTTAAAGAGGAAAAAAAGATAGACTCACCTGAATTGCTTATTATTGAAAATAGTGTCTCTAAAAGTAGAAAAAGAAAAGTAACACGGGAGGGATGTAAAGCAAGAATTGCTTTTAGGAGAACTACTGATGGCAAATATGAAGTCTCCAAATTTTATGAAGGTCATTCACATGGGCTAGTCACACCTAGAAAGAAGCAATTCTTAAGATCAGCAAGGAGTGTAAACAATGTTCATAAGAATATATTGTTTTCCTGCAATAAAGCTAACGTGAGGGCTTCAAAAAGTTATCAAATAATAAAGGAGCAGGTTGGAAGTTATGAAAATATAGGATGCACACAAAGAGATTTGCAAAATTATTCAAGAAATTTGAAAGAGTTGATCAAAGACTCTGATGCAGACATGTTTATTGATAATTTTAGAAGAAAACATGAGATAAACCCTTCATTTTTCTATGATTATGAAGCTGATGATGAGGGGAAGCTGAAGCATGTGTTTTGGGCTGATGGTATTTGTCGAAAAAATTACTCTTTGTTTGGAGATGTTGTTTCATTTGACACAACATACCGTACAAACAAGTATTTTATGATTTTTGCACCATTCACTGGCATAAATAATCATCGTCAAAGCATAACCTTTGGAGCTGCACTTTTAAAAAATGAAAAAGAAGAGTCGTTTGTTTGGTTGTTTAAGACATTTTTGAAAGCAATGGGGGGACATAAACTTGTTATGATAATAACAGATCAAGACCAGGGTATGAAGAATGCAGTGAAAGAGGTTTTGAACGGGTCTTCTCATAGATTTTGCATGTGGCATATTCTAAAAAAACTTTCAGAAAAGGTGGGTAGTTCCTTGAATGAGAATAAGGCATTTAATGAACGTCTGTTGTCATGTGTTTGGAACTCAGAGTCCTCGGAAGAATTTGAATTAGAGTGGAATAATATTATTAATGATTACAACTTGGAAAAAAATGGATGGCTTTCTACAATGTATGATCTAAGAAGCATGTGGATACCGGCTTATTTTAAAGATACATTTATGGCTGGAATTATGAGAACGACCTCAAGATCAGAGAGTGAAAATTCATTCTTTGGCAACTACTTGAATAAGAACCTAACTTTAGTGGAATTTTGGATGCGATTTGATTCTGCTTTAGAAGCACAGAGACATAAAGAACTTCTTGCAGATAATAATACACTTCATTCTAATCCAGAATTGAAGATGCACATGGATTTAGAGAAGCACGGTAGAGAGATTTATACTCATGAAAATTTTTACATATTTCAGAATGAGTTGTGGAGTGCATGTGTAGATTGTGGAATTGAAGGAACGAAAGAGGAAGGTGAGAATATATTATATTCTGTACTTGATAATGTTGTGGTCAATGGCACTAAAGTGAGAAAGCATCGAGAAGTTGTTTATTGTCTTTCTAATAATGTTGCACGATGTTCATGCAAAATGTTTAACTCAGAAGGCATGCCATGTCGGCATATTCTTTTTGTATTAAAGGGGAAATGTTTTAGTGAAATTCCAAGTCATTACATTGTCAATAGATGGACGAAATTGGCAACAAGTAGACCAGTTTTTGATTGTGATGGAAATGTTTTAGAGGCATGTTCTAAATTTGAAAGTGAGAGGACATTAGTCGCAAAAGCATGGTCACAATTGATTAAATGCATGCATATGGCTGGTACAAATAAAGAGAAATTGCTCCTCATTTACAATGAGGGTTGTAGTATTGAATCAAAAATGTCTAAAATGAAGAGTGATGTATCAAGACCCTTAGATGAATTGGAGGCTTTTATTGGTTCCAGTGTACCTAAAAAAATTGAAGTTCTTCCACTTGAACCATCAAATACCAAAGGTTGTGGAAAACACATCAAAGGGGGGAAAGAGAAGGCAATTGAACAACAACAAAAGAGAACAAGGCTTTGTAAAGCTTGCAAGCAATATGCATCCCATGATAGTCGCAATTGTCCCACAAAATCCTCTTCATAG 2256 0.3506 MELDDNEVDSPSPSKDFNDLENTLVEWIPACDDELKPVIGKVFDTLIDGADFYKTYAHAGGFSVRNSTETKDNVGVKWKYFLCSKEGFKEEKKIDSPELLIIENSVSKSRKRKVTREGCKARIAFRRTTDGKYEVSKFYEGHSHGLVTPRKKQFLRSARSVNNVHKNILFSCNKANVRASKSYQIIKEQVGSYENIGCTQRDLQNYSRNLKELIKDSDADMFIDNFRRKHEINPSFFYDYEADDEGKLKHVFWADGICRKNYSLFGDVVSFDTTYRTNKYFMIFAPFTGINNHRQSITFGAALLKNEKEESFVWLFKTFLKAMGGHKLVMIITDQDQGMKNAVKEVLNGSSHRFCMWHILKKLSEKVGSSLNENKAFNERLLSCVWNSESSEEFELEWNNIINDYNLEKNGWLSTMYDLRSMWIPAYFKDTFMAGIMRTTSRSESENSFFGNYLNKNLTLVEFWMRFDSALEAQRHKELLADNNTLHSNPELKMHMDLEKHGREIYTHENFYIFQNELWSACVDCGIEGTKEEGENILYSVLDNVVVNGTKVRKHREVVYCLSNNVARCSCKMFNSEGMPCRHILFVLKGKCFSEIPSHYIVNRWTKLATSRPVFDCDGNVLEACSKFESERTLVAKAWSQLIKCMHMAGTNKEKLLLIYNEGCSIESKMSKMKSDVSRPLDELEAFIGSSVPKKIEVLPLEPSNTKGCGKHIKGGKEKAIEQQQKRTRLCKACKQYASHDSRNCPTKSSS* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4323 751 SMART 26again6 567 594 IPR006564 GO:0008270
Mal2g4323 751 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 29 164 IPR031052 GO:0006355
Mal2g4323 751 Coils Coil 196 216 - -
Mal2g4323 751 Pfam FAR1 DNA-binding domain 51 147 IPR004330 -
Mal2g4323 751 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 29 164 - -
Mal2g4323 751 ProSiteProfiles Zinc finger SWIM-type profile. 560 592 IPR007527 GO:0008270
Mal2g4323 751 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 215 624 - -
Mal2g4323 751 Pfam SWIM zinc finger 563 588 IPR007527 GO:0008270
Mal2g4323 751 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 215 624 IPR031052 GO:0006355
Mal2g4323 751 Pfam MULE transposase domain 268 362 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4323 Mal-Chr2 83401783 83404038 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal2g4323 FAR1 1.5e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4323 - - soe:110798711 796.193