Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4306 ATGTCAGAACAAGAATCTGATTCATGGAGCTTCATGTTGGTCTGTTTTTTGATCCTTTTCTCAGGTAAACTAGCTGCTGGAGATTTATTGAAAACAGACAAACAAGTACTAATGAATTTGAAATCCTATTTGGAAAATCAAACAGTTTCAAATAGAGGAGACTATAGAAGATGGAACAAGAACAATTCAAATCCTTGTGAATGGTCAGGAATATCATGTAGACAAATCAAAGGTAAAAATAAATGGAGGGTTGTGAGTGTAGATATCTCAGCAAGTGAGATTTCAGGTAAAATGTTTAAGAATTTCTCTAAGTTAAGTGAACTCACACACCTTGATGTCTCATGGAACACTCTCTCTGGAGAGATTCCTGAGGATATAAGGAAGTGTAAGAATCTTGTCTATCTCAATTTATCTCATAATATTCTTGAGGGGGAGATGAATTTGACAGGTTTGAGAAAGTTGCAAACATTGGATTTGTCTATGAATAGAATTCAAGGTGAACTTGAGTTGAATTTTCCTGAGAATTGTGATGGTTTGGTTACTTTGAATGTTTCAGATAATCACTTCTTTGGTAGGATTGATAAGTGCTTTGATGAGTGTTCAAAGTTGAAGTATTTGGATTTGAGTTCAAATAATCTAAGTGGTGCTTTATGGAATGGAATTTCAAGGCTGAAACAGTTTTCAATTTCTGAGAATTTTCTAAGTGGGATTGTTCCTTCACAAGCTTTTCCAATGAATTGTAGTCTTGAAAAATTGGATCTCTCAGTTAATGGATTTTTTGGTAAACCTCCTAAGGAAGTTGCAAACTGCAAAAATTTAGAGATTCTCAATCTTTCTAGTAACAATTTTAGTGGTGAAATACCTCATGAAATTGGTTCAATTACTGGTCTCAAATCATTGTTCTTGCAGAATAACACCTTCTCAAGAGATATTCCAGATACCCTTTTGAATTTGACCAATTTGTTTATTTTGGATATAAGCAGAAACAAATTTGGTGGTGAGATACAAGAGATTTTTGGGAAATTCAAGCAATTGAAGTTTCTTTTGTTGCACACAAATTTTTATGTTAAAGGATTGAATACATCAGGAATTTTCACATTGACTAATCTTACAAGACTAGAATTAAGTTACAACAACTTTTCAGGTCCATTACCTAATGAAATTTCTCAAATGTCTGGTCTCATATTCTTAACATTAAGCAACAACAACTTTAATGGAACCATTCCATCTGAATTAGGAAAGTTGAGTAAATTACAAGCACTTGAACTTGCTTTCAATAGTTTCAGTGGAAAAATTCCACCAAGCCTTGGAAACTTGAATTCTCTCTTGTGGTTAATGCTTGCAAACAATTCATTAACAGGTGAAATTCCACCCGAGTTAGGAAATTGTTCGAGTTTGTTATGGTTGAACCTTGCAAACAACAAACTCACTGGAAAATTTCCTTCCGAGTTAACCAAAATTGGAAGAAATGCTATGGAAACATTTGAATCAAATCATAAGAACATGGTTGGAGTTGTTGCTGGAAATAGCGAATGCTTATCGATGAAAAGATGGATACCGGCTGATTACCCTCCATTCAGTTTTGTGTATAGTATCTTAACCAGAAAAAATTGTAGATCCCTTTGGGATAGATTGCTCAAAGGATATGGAATTTTTCCTATGTGTGCATCTGAACCTTCTACTAGATCATCTCATAAATTCGGTTATGTTCAATTAAGTGGTAACCAAATTAGTGGTGAAATTCCTTCAGAAATTGGAACCATGTTGAATTTCAGTATGTTACATTTAGGTGACAACAAATTCAGCGGCGAATTCCCTCCTGAGATTGGTGGCTTACCACTTATAGTGTTGAACATGACTAGGAACAAATTTTCAGGTGAAATTCCTAGGGAAATTGGTGACATGAAGTGTATGCAGAATCTTGATTTATCTTGGAACAATTTCTCAGGTGCATTTCCAACAAGTTTGGTTAATTTGGATGAGCTTAGCAGGTTCAACATCTCATATAATCCTTTGTTATCAGGTACCGTACCGCTGTCTGGACATTTACTTACTTTTGACAAAGATTCATATTTAGGTGATACCCTCTTAGATTTTCCAAAGTTCTTTGATAACACTTCAGATGGAAAAAACAAAACCCTTCACAAAAAAATGAAAAAAACCACAAAATGGTATCTCTGTGTTGCTCTAACACTAGCTAGTTTAGTTTCTGGACTTATTTTTCTAACCGTTTATTTCTTGGTGAAAAATCCACCTTCGGAACAAGGAAAGTTTCTGAAGGATAGAAACCGAAAGCATGATGATTCAGTTAGCTATGGATTATCTGATTCCATCAAGATAATCCACTTGAACAATATAGTTTTCACACATGCCGACATCTTGGAAGCAACTAACAATTTCAAAGAGGAAAGAATCATAGGAAAAGGTGGTTTCGGAACGGTCTACAAAGGAGTTTTTCCAGATGGAAGAGAAGTGGCAGTGAAGAAGTTACAAAGGGAAGGAATTGAAGGCGAAAAAGAATTCAAAGCCGAAATGAAAGTCCTTAGTGGTCAAGAATTTGGTTGGCCTCATCCAAATCTTGTCACACTCTATGGTTGGTGTCTATATGGTTCACAAAAGTTACTAGTTTATGAGTACATAGGAGGTGGAAGTTTAGAAGAACTAGTAACCGATAAGAAAAATTTGACGTATAAAAGGCGGTTAGAAGTCGTGATCGACGTGGCTAAAGCATTGGCTTATCTACACCATGAATGTTACCCTCCAATTGTGCATAGAGATGTGAAGGCTAGTAATGTGTTGCTTGACAAAGAAGGTAAAGCAAAAGTAACCGATTTCGGACTCGCTAGAATTGTCGATGTCGGAGATAGTCATGTGAGTACAATTGTAGCTGGAACTGTTGGTTATGTTGCACCTGAATATGGACAAACATGGCATGCTACAACAAAAGGTGATGTGTATAGTTTTGGTGTTTTGGTTATGGAGTTGGCAACTGGGAGAAGAGCTGTGGATGGAGGTGATGAATGTTTGGTTGAATGTGTTAGACGTGTCATTGGTAATGGTAGAAATGGATTGAGTAATTTTGGGCTAGTTGGTGGTGCAAAGGAGATGCTTGAGTTGCTTCAAGTTGGAGTAAAGTGCACAAATGATTCACCACAAAATAGGCCTAACATGAAAGAGGTTCTAGCTATGTTGATCAAGATATTCAATCTTTATAGAAATTCAAATTATTGA 3231 0.3572 MSEQESDSWSFMLVCFLILFSGKLAAGDLLKTDKQVLMNLKSYLENQTVSNRGDYRRWNKNNSNPCEWSGISCRQIKGKNKWRVVSVDISASEISGKMFKNFSKLSELTHLDVSWNTLSGEIPEDIRKCKNLVYLNLSHNILEGEMNLTGLRKLQTLDLSMNRIQGELELNFPENCDGLVTLNVSDNHFFGRIDKCFDECSKLKYLDLSSNNLSGALWNGISRLKQFSISENFLSGIVPSQAFPMNCSLEKLDLSVNGFFGKPPKEVANCKNLEILNLSSNNFSGEIPHEIGSITGLKSLFLQNNTFSRDIPDTLLNLTNLFILDISRNKFGGEIQEIFGKFKQLKFLLLHTNFYVKGLNTSGIFTLTNLTRLELSYNNFSGPLPNEISQMSGLIFLTLSNNNFNGTIPSELGKLSKLQALELAFNSFSGKIPPSLGNLNSLLWLMLANNSLTGEIPPELGNCSSLLWLNLANNKLTGKFPSELTKIGRNAMETFESNHKNMVGVVAGNSECLSMKRWIPADYPPFSFVYSILTRKNCRSLWDRLLKGYGIFPMCASEPSTRSSHKFGYVQLSGNQISGEIPSEIGTMLNFSMLHLGDNKFSGEFPPEIGGLPLIVLNMTRNKFSGEIPREIGDMKCMQNLDLSWNNFSGAFPTSLVNLDELSRFNISYNPLLSGTVPLSGHLLTFDKDSYLGDTLLDFPKFFDNTSDGKNKTLHKKMKKTTKWYLCVALTLASLVSGLIFLTVYFLVKNPPSEQGKFLKDRNRKHDDSVSYGLSDSIKIIHLNNIVFTHADILEATNNFKEERIIGKGGFGTVYKGVFPDGREVAVKKLQREGIEGEKEFKAEMKVLSGQEFGWPHPNLVTLYGWCLYGSQKLLVYEYIGGGSLEELVTDKKNLTYKRRLEVVIDVAKALAYLHHECYPPIVHRDVKASNVLLDKEGKAKVTDFGLARIVDVGDSHVSTIVAGTVGYVAPEYGQTWHATTKGDVYSFGVLVMELATGRRAVDGGDECLVECVRRVIGNGRNGLSNFGLVGGAKEMLELLQVGVKCTNDSPQNRPNMKEVLAMLIKIFNLYRNSNY* 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4306 1076 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 1070 - -
Mal2g4306 1076 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Mal2g4306 1076 Pfam Protein kinase domain 800 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g4306 1076 SUPERFAMILY Protein kinase-like (PK-like) 781 1065 IPR011009 -
Mal2g4306 1076 SMART LRR_typ_2 200 224 IPR003591 -
Mal2g4306 1076 SMART LRR_typ_2 105 129 IPR003591 -
Mal2g4306 1076 SMART LRR_typ_2 367 391 IPR003591 -
Mal2g4306 1076 SMART LRR_typ_2 439 463 IPR003591 -
Mal2g4306 1076 SMART LRR_typ_2 294 318 IPR003591 -
Mal2g4306 1076 SMART LRR_typ_2 151 175 IPR003591 -
Mal2g4306 1076 SMART serkin_6 800 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g4306 1076 Gene3D Phosphorylase Kinase; domain 1 763 879 - -
Mal2g4306 1076 SUPERFAMILY L domain-like 222 676 - -
Mal2g4306 1076 ProSitePatterns Serine/Threonine protein kinases active-site signature. 922 934 IPR008271 GO:0004672|GO:0006468
Mal2g4306 1076 Pfam Leucine Rich repeat 270 286 IPR001611 GO:0005515
Mal2g4306 1076 Pfam Leucine Rich repeat 152 167 IPR001611 GO:0005515
Mal2g4306 1076 Pfam Leucine Rich repeat 108 121 IPR001611 GO:0005515
Mal2g4306 1076 Pfam Leucine Rich repeat 200 215 IPR001611 GO:0005515
Mal2g4306 1076 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 1070 - -
Mal2g4306 1076 Gene3D Ribonuclease Inhibitor 29 174 IPR032675 -
Mal2g4306 1076 CDD STKc_IRAK 806 1067 - -
Mal2g4306 1076 ProSiteProfiles Leucine-rich repeat profile. 131 152 IPR001611 GO:0005515
Mal2g4306 1076 Gene3D Ribonuclease Inhibitor 175 244 IPR032675 -
Mal2g4306 1076 ProSiteProfiles Protein kinase domain profile. 800 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g4306 1076 Gene3D Transferase(Phosphotransferase) domain 1 881 1075 - -
Mal2g4306 1076 SUPERFAMILY L domain-like 62 307 - -
Mal2g4306 1076 Gene3D Ribonuclease Inhibitor 245 338 IPR032675 -
Mal2g4306 1076 ProSitePatterns Protein kinases ATP-binding region signature. 806 829 IPR017441 GO:0005524
Mal2g4306 1076 Gene3D Ribonuclease Inhibitor 352 491 IPR032675 -
Mal2g4306 1076 Gene3D Ribonuclease Inhibitor 549 702 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4306 Mal-Chr2 81977256 81981046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4306 418 680 Receptor kinase-like Gene Family AT1G55610 28.044 8.36e-13 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Mal2g4306 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4306 - - mtr:MTR_3g437630 1971.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g4306 2 81977256 81981046 Mal2g4306 2 81977256 81981046 ECH