Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4281 ATGGCCTCTCAAACCCCTACCGATTCTCTCGATGATTCCATTCCTACCGTCGACGACTACGTTTTGGAAAATGGACCAGAAGGATTGTCATGGGACACATTTCATTATGTGTACGAGCTTGTACAAAAGGGAAATTTGGCCTTTCGAGACAACAGAATGGAAGAGGCAATCAACTTTTACTCAAGAGCCAATAACATCAAATGTAGTGATCCAATCATCCTCGGGAATCGAAGTGCAGCTTATATTAGGATTAGCCAATATTTAATGCATAGATCATCATCATCCTCAGAACATAGGCCATTGAGTGGGCTTGATCCCACAACACTTGCCGAACTGGGTTTGAAGGATGCTACAAAGCTTGTGGAACTCCAAAGTGGTTCAGTAAAACCATACCTTTTGAAGGCTAATGCTCTTCTTCTGTTAGAAAAATATGATGTGGCTCGGGATGTTATTCTTTCAGGACTTCAAGTTGATCCTTTTAGTAATTCCCTTCGGGAATGTCTTCAAAGAGTGGAGAGAGTATCATCTAGTTTAACAGGGAGGAGTACACATGGACAACCAGAGCGGAATGATGACTTTGATTGCACTCTCTGCCTGAAGTTACTGTATGAACCTGTCACAACTCCCTGTGGACATTCTTTTTGCCGTTCTTGTCTATTTCAGTCAATGGATCGTGGGAACAGATGCCCATTGTGCAGGACAGTTCTTCTCATTAGCCCCAGAACATGTTCAATTAGTGTGACATTGAAGAGCATCATACAAAGAAACTTTCCAGAGGAATATGCTGAAAGGAAGCAAGAGAATGACAGTTTAGTCAACATTGGTGTAGATATGCTCCCTCTTTTTGTCATGGATGTTGTCTTACCGTGTCAAAGGTTTCCACTAAATATATTTGAACCTCGTTATAGACTTATGGTAAGAAGAATAATGGAAGGCAATCATCGAATGGGAATGGTTATAATAGATGCTTCAACAGGTTCATTAGCAGAGTTTGGCTGTGAAGTGGAAATCACAGAGTGTGAGCCACTTCCAGATGGTCGTTTTTATATAGAGATTGAAGGTCGTAGGAGATTTCGCAACCTCCGTTCTTGGGATCAAGATGGATATCGTGTTGCAGAAGTTGAATGGATACAGGATATTATGCCGCCAGAAGGGACACAAGAAAGAGAGGATGAATTGACACATAATGCAGCCGAAAGTGCTCGAACATGGATAGGAAGAGCTAAAGAAGCAGCAAGACAAGATCAAAGAAGATTAGAGAAACTCGTGAATGTTGAAGGAATGATACCCTCATTAAGAGACCCTGAGCGCTTTAGTTTTTGGCTGGCTACCCTCTCGAATCGGAGGCCTTCAGAAAGATTGGATCTCCTACGCATTAGAGATACTACAGAGAGAATTAGACGAGGCCTGATATTTCTTCGAGCAGAGGAACAAGGCTGCAGAATTCAGTAA 1452 0.4208 MASQTPTDSLDDSIPTVDDYVLENGPEGLSWDTFHYVYELVQKGNLAFRDNRMEEAINFYSRANNIKCSDPIILGNRSAAYIRISQYLMHRSSSSSEHRPLSGLDPTTLAELGLKDATKLVELQSGSVKPYLLKANALLLLEKYDVARDVILSGLQVDPFSNSLRECLQRVERVSSSLTGRSTHGQPERNDDFDCTLCLKLLYEPVTTPCGHSFCRSCLFQSMDRGNRCPLCRTVLLISPRTCSISVTLKSIIQRNFPEEYAERKQENDSLVNIGVDMLPLFVMDVVLPCQRFPLNIFEPRYRLMVRRIMEGNHRMGMVIIDASTGSLAEFGCEVEITECEPLPDGRFYIEIEGRRRFRNLRSWDQDGYRVAEVEWIQDIMPPEGTQEREDELTHNAAESARTWIGRAKEAARQDQRRLEKLVNVEGMIPSLRDPERFSFWLATLSNRRPSERLDLLRIRDTTERIRRGLIFLRAEEQGCRIQ* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4281 483 Gene3D Tetratricopeptide repeat domain 36 174 IPR011990 GO:0005515
Mal2g4281 483 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 181 274 IPR013083 -
Mal2g4281 483 ProSiteProfiles Lon N-terminal domain profile. 276 475 IPR003111 -
Mal2g4281 483 SUPERFAMILY PUA domain-like 279 473 IPR015947 -
Mal2g4281 483 Gene3D - 409 475 - -
Mal2g4281 483 SUPERFAMILY TPR-like 36 168 IPR011990 GO:0005515
Mal2g4281 483 ProSitePatterns Zinc finger RING-type signature. 210 219 IPR017907 -
Mal2g4281 483 SMART ring_2 195 232 IPR001841 -
Mal2g4281 483 Gene3D - 277 379 IPR046336 -
Mal2g4281 483 Pfam ATP-dependent protease La (LON) substrate-binding domain 279 473 IPR003111 -
Mal2g4281 483 Pfam Zinc finger, C3HC4 type (RING finger) 195 232 - -
Mal2g4281 483 SUPERFAMILY RING/U-box 190 257 - -
Mal2g4281 483 PANTHER 43KDA POSTSYNAPTIC PROTEIN-RELATED 13 476 - -
Mal2g4281 483 SMART lon_5 278 475 IPR003111 -
Mal2g4281 483 PANTHER RING FINGER PROTEIN 127 13 476 - -
Mal2g4281 483 ProSiteProfiles Zinc finger RING-type profile. 195 233 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4281 183 236 C3H Transcription Factor Family AT1G74990 35.088 1.91e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4281 - - gmx:100802277 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g4281 2 80759793 80772959 Mal2g4281 2 80759793 80772959 ECH