Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4272 ATGAAATCAGCAAGACATGTAATTGATGCATTGAATGCAGAGCGGGAACGTATAGATCTCATACTAGCTGAAGTTGGCCTTCCGAAGAAGGGTACGAAGATGTTAAAGTACATAGCACGAGACAAAGAATTGTGCAGAATTCCTATTATAATGATGTCCGTACAAGATGAGGTATCCTCTGTTGTTAAGTGCTTGAGATTTGGAGCAGCAGACTATCTAGTAAAGCCTTTATGCACAAATGAACTATTAAATTTGTGGACACACATGTTGAGAAGGAGGCGCAAGGAGATGCTTAATATGTCGTGGGAGCCATAA 315 0.4032 MKSARHVIDALNAERERIDLILAEVGLPKKGTKMLKYIARDKELCRIPIIMMSVQDEVSSVVKCLRFGAADYLVKPLCTNELLNLWTHMLRRRRKEMLNMSWEP* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4272 104 Gene3D - 2 101 - -
Mal2g4272 104 ProSiteProfiles Response regulatory domain profile. 1 90 IPR001789 GO:0000160
Mal2g4272 104 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR1 2 95 - -
Mal2g4272 104 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 95 IPR045279 GO:0009736
Mal2g4272 104 SUPERFAMILY CheY-like 13 95 IPR011006 -
Mal2g4272 104 Pfam Response regulator receiver domain 6 84 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4272 Mal-Chr2 80608780 80609954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4272 1 94 Response Regulator Gene Family AT5G61380 75.789 1.12e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal2g4272 Response_reg 1.1e-11 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4272 K12127 - gmx:100813917 151.369