Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4256 ATGGAAAATGTTTCAATTATGTGTAAGGAAGAGGATCAGATCATTTTGCTTCCAGGGTTTAGGTTTCATCCAACTGATGAAGAGCTTATTAGTCATTACCTTTATAAAAAGGTAATTGACACAAATTTTTCTGCTAGGGCCATTGGAGAGGTGGATTTGAACAAATCAGAACCTTGGGATTTGCCATGTAAAGCCAAAATGGGTGAAAAAGAGTGGTACTTTTTTTGTGTGAGAGATAGAAAGTATCCAACTGGTTTGAGGACTAATAGAGCTACTGAAGCTGGATATTGGAAGGCAACAGGAAAAGATAAGGAGATTTACAGAGGAAAAACTCTTGTTGGAATGAAGAAAACTCTTGTTTTCTACAAAGGAAGAGCACCCAAAGGAGAGAAAAGTAATTGGGTAATGCATGAATTTAGACTTGAGGGTAAATTCTCTATTTACAATCTCCCTAAAACTGCGAAGAATGAGTGGGTGATTTGCAGGGTATTTCAGAAGAGTTTATCAGGCAAAAAGACATGTCTTTCTGGGATAATGAGGTTAGAATCTTTTGGAAATGAAATAGGTTCTTCCATTCTTCCACCACTCACAAATTCTTCATCTTATTCCATTGACAAAATCAAATCACCTTACGTGTCCTGCTTCTCCAATCCAATTGAAAGAAACCATGTTGGAATCTTTGATTCCTTTAACAACACCCCTTTTGAGGTTCCGCCAAAAAATACACTTACTATTGGTTCATTTTACTCTACTCAAGAGGTTGAAGCCTCACCAAATTTCCCATTACCTGGTTCTGTTTATAATAATGGATCAAACTTTGAGAATCAGCAGCACCAACCTGCTTCAATTGCACCAATTGATCTATCTACCTTATGGAATTACTAA 885 0.3684 MENVSIMCKEEDQIILLPGFRFHPTDEELISHYLYKKVIDTNFSARAIGEVDLNKSEPWDLPCKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKTLVGMKKTLVFYKGRAPKGEKSNWVMHEFRLEGKFSIYNLPKTAKNEWVICRVFQKSLSGKKTCLSGIMRLESFGNEIGSSILPPLTNSSSYSIDKIKSPYVSCFSNPIERNHVGIFDSFNNTPFEVPPKNTLTIGSFYSTQEVEASPNFPLPGSVYNNGSNFENQQHQPASIAPIDLSTLWNY* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4256 294 Gene3D NAC domain 25 169 IPR036093 GO:0003677|GO:0006355
Mal2g4256 294 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 270 - -
Mal2g4256 294 Pfam No apical meristem (NAM) protein 18 141 IPR003441 GO:0003677|GO:0006355
Mal2g4256 294 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Mal2g4256 294 PANTHER NAC DOMAIN-CONTAINING PROTEIN 100 6 270 - -
Mal2g4256 294 SUPERFAMILY NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4256 Mal-Chr2 79704365 79705946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4256 16 257 NAC Transcription Factor Family AT5G07680 66.803 4.83e-112 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal2g4256 NAM 2.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4256 - - gmx:100798002 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4262 5 113648706 113649999 Mal2g4256 2 79704365 79705946 ECH
Mal2g4256 2 79704365 79705946 Mal2g4256 2 79704365 79705946 ECH