Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4223 ATGGAGAATATTGATCCACTCACGGTTTGGAAATACTCCTATGATGATTATGATCCATTGGCACCTCCTTTCCATTTTTCTTCATATAATAATAATCTTTATAGTGATGGTTATGTTTCGAAAGATTGGTCACATTATGGATTTCCCATGCAAGATACCAATTTTGATGCTATCCCTCCAATGGATTATTATTATCATGACTTTCGTTATGAAACTATTCCAAATGAATTACAAACACCATTAACCATAGAAGACTATGGTATTCGTGATGATAAAAATATGGTTTCAGTGTGGAACGAATTTGATGCTGGATTATATTCGGATAAACATATGTTTTTGATTAACAACGATATTGAAGAAAGTGTTGGAAATGGCATTGTGATCAAGGGTAAGAGATGTAAAGAAGAGAATACTAATAGTGCAAGAATGTTAACAAAGAAGACAATTTCTGAGTTCTTCTACATGCCAATATCACAAGCAGCAAGAGAGCTTAATGTTGGCCTTACTCATTTGAAGAAAAGGTGTAGGGACCTTGGAATTCAAAGGTGGCCACATAGGAAACTAATGAGCCTTCAAACCCTTATAAAGAATGTTCAAGAGCATGGTAATGAAAGTGATGAAAAAATAAGGAATGCGGTGGAATTATTGCAGAAAGAAATGAAGAAAGTAGAGGAAAAGCCAGATCTGCAATTGGAAGAAAACACAAAAAGGCTTAGACAAGCATGTTTTAAGGCAAATTACAAGAAGAGAAGGCTCATGGTCATGAAGTTAATGGATCAGCAGCAGTCTTCTCTTAGTGAAAGTACTGAAAGTGTCAATGATACCAAAAGGGGTTAA 837 0.3501 MENIDPLTVWKYSYDDYDPLAPPFHFSSYNNNLYSDGYVSKDWSHYGFPMQDTNFDAIPPMDYYYHDFRYETIPNELQTPLTIEDYGIRDDKNMVSVWNEFDAGLYSDKHMFLINNDIEESVGNGIVIKGKRCKEENTNSARMLTKKTISEFFYMPISQAARELNVGLTHLKKRCRDLGIQRWPHRKLMSLQTLIKNVQEHGNESDEKIRNAVELLQKEMKKVEEKPDLQLEENTKRLRQACFKANYKKRRLMVMKLMDQQQSSLSESTESVNDTKRG* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4223 278 Coils Coil 206 226 - -
Mal2g4223 278 Pfam RWP-RK domain 144 191 IPR003035 -
Mal2g4223 278 PANTHER PROTEIN RKD4 56 267 IPR044607 GO:0003700
Mal2g4223 278 PANTHER PROTEIN RKD1-RELATED 56 267 - -
Mal2g4223 278 ProSiteProfiles RWP-RK domain profile. 125 212 IPR003035 -
Mal2g4223 278 MobiDBLite consensus disorder prediction 259 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4223 Mal-Chr2 78505923 78507329 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4223 131 251 AtRKD Transcription Factor Family AT1G18790 62.500 1.43e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mal2g4223 RWP-RK 1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4223 - - mtr:MTR_3g435550 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g4223 2 78505923 78507329 Mal2g4223 2 78505923 78507329 ECH