Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4198 ATGGGAAGTTCTTGTACAAAACCAGTTGCTCATGTCTCTTCATCAAATATTTCTGGAAGTAAGAAGCCTCAAAGCACGAGCACGACAAAGCGGTATTCCAATTCATCTGAACAAAGAGCTTCTTTCCAAAGTTCACAAGAAAATGTGGATACATCGATCTCCAACAAACTTAAGTCCTTCAGCTTGATTGATCTAAAGGAGGCTACTAAGAATTTCCGGCGAGAATACTTAATTGGAGAGGGAGGGTTTGGGCGTATCTTCAAGGGATGGATTGATGAGAACACATATGCTCCCACAAAACCAGGGAGTGGAATTGTAGTGGCCATCAAGAATCTCAAGCCAGAAAGCTTTCAAGGCCACAAGGAATGGCTTGCAGAAGTAAATTATTTAGGTCAGCTTCACCATGAGAATCTGGTGAAACTTATTGGTTACTGCTTGCAAGGAAAAAACAGGCTTCTAGTTTATGAGTTCATGCAAAAAGGAAGTTTGGAAAATCATTTATTCAGAAAAAATGTTCAACCTATTGCCTGGGCTACTCGTGTCAACATTGCTGTTGGTGTTGCAAAAGGATTAGCATTCTTACATTCGTTGAAGGCAAATGTTATCTTTCGTGACTTAAAGGCCTCCAATATCCTACTTGATTCAGATTTCAATGCAAAGCTTTCGGATTTTGGGTTGGCAAGAGATGGTCCTACTGGGGATAATACTCATGTTTCAACTAGAATCATTGGAACTCAAGGTTATGCTGCTCCAGAGTATGTTGCTACAGGTCATTTGACACCGAGGAGTGATGTATACAGCTTTGGTGTTGTCTTGTTAGAGTTACTAACAGGAAAACGTGCAGTAGAAGACGCAAGACCTGGATTTTCTGAAGAAACTCTTGTGGATTGGGCAATGCCTTTCTTGAGTGATAGCAGAAGAGTTTTGAGAATCATGGACACAAGATTAGGTGGTCAATACTCAAAGAAAGGAGCACAAGCTGCAGCTGCACTAGCATTACAATGCTTAAACACAGATCCTAAATTTAGACCACCTATGGTAGATGTTCTTGCAACATTGGAAGGACTTCAATCATCAAATGCATTCCAAAGGACACCAAAATATGGAAATGAGAGTCCTGCAACCAAACATTCTTCTCATTCCCTAAGGTAA 1152 0.4054 MGSSCTKPVAHVSSSNISGSKKPQSTSTTKRYSNSSEQRASFQSSQENVDTSISNKLKSFSLIDLKEATKNFRREYLIGEGGFGRIFKGWIDENTYAPTKPGSGIVVAIKNLKPESFQGHKEWLAEVNYLGQLHHENLVKLIGYCLQGKNRLLVYEFMQKGSLENHLFRKNVQPIAWATRVNIAVGVAKGLAFLHSLKANVIFRDLKASNILLDSDFNAKLSDFGLARDGPTGDNTHVSTRIIGTQGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGKRAVEDARPGFSEETLVDWAMPFLSDSRRVLRIMDTRLGGQYSKKGAQAAAALALQCLNTDPKFRPPMVDVLATLEGLQSSNAFQRTPKYGNESPATKHSSHSLR* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4198 383 Gene3D Phosphorylase Kinase; domain 1 30 157 - -
Mal2g4198 383 PANTHER TYROSINE KINASE FAMILY PROTEIN 18 380 - -
Mal2g4198 383 MobiDBLite consensus disorder prediction 361 383 - -
Mal2g4198 383 ProSitePatterns Protein kinases ATP-binding region signature. 78 110 IPR017441 GO:0005524
Mal2g4198 383 SMART serkin_6 72 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g4198 383 CDD STKc_IRAK 78 356 - -
Mal2g4198 383 SUPERFAMILY Protein kinase-like (PK-like) 46 360 IPR011009 -
Mal2g4198 383 MobiDBLite consensus disorder prediction 1 48 - -
Mal2g4198 383 ProSiteProfiles Protein kinase domain profile. 72 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g4198 383 Gene3D Transferase(Phosphotransferase) domain 1 158 375 - -
Mal2g4198 383 Pfam Protein tyrosine and serine/threonine kinase 77 352 IPR001245 GO:0004672|GO:0006468
Mal2g4198 383 PANTHER OS01G0588500 PROTEIN-RELATED 18 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4198 Mal-Chr2 77174421 77177559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4198 43 353 Glycoside Hydrolase AT3G07070 49.842 1.50e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal2g4198 PK_Tyr_Ser-Thr 9.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4198 - - gmx:100800654 606.675