Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4197 ATGACAATGGCGGCCCCAGGGCAACTGAACGTCATTGAATCTCCTTCGCGTGGATCTCGTAGCGTCGATTGCTTTGAGAAGTTGGAGCAAATCGGCGAAGGCACTTATGGTCAGGTTTACATGGCCCGAGAGATCGAAACCGGTGAAATTGTTGCTCTCAAGAAAATACGTATGGACAATGAGAGAGAAGGGTTTCCTATAACTGCTATACGTGAAATCAAGATTCTAAAGAAACTACACCATGAAAATGTAATCAAGTTGAAGGAAATTGTCACGTCTCCAGGCCCTGAGAAAGATGATCAAGGAAGGCCAGATGGCAACAAATACAAAGGGGGCATATATATGGTCTTCGAATATATGGATCATGATTTAACTGGTCTTGCGGACCGGCCTGGCATGAGATTTACTGTCCCCCAGATTAAGTGTTACATGAGGCAGCTTTTGACGGGACTTCACTATTGTCATGTCAATCAAGTGCTTCACCGTGATATCAAAGGCTCAAATCTTCTCATAGATAATGAAGGTAATCTGAAGCTGGCAGATTTTGGATTGGCAAGGTCATTTTCAAATGAGCACAATGCAAACCTTACAAATCGAGTCATCACTTTATGGTACAGACCCCCTGAGTTACTGCTGGGGACAACAAGGTACGGGCCAGCTGTTGATATGTGGTCTGTTGGGTGCATTTTCGCTGAGCTTCTTCACGGGAAGCCCATCTTTCCTGGAAAAGATGAGCCGGAGCAATTAAACAAGATTTTTGAGCTTTGTGGAGCACCGGATGAGGTGAACTGGCCCGGAGTTGCTAAGACTCCTTGGTACAATCAGTTTAAGCCAACAAGACCGATGAAAAGGCGTCTGAGGGAAGTTTTTAGACATTTTGATCGCCATGCATTGGAGTTGTTGGAGAAGATGCTCACACTTGATCCAGCTCAGAGAATTCCTGCCAAAGATGCACTTGATGCTGAGTACTTCTGGACTGATCCATTACCATGTGATCCCAAGAGTTTACCCAAGTACGAGTCATCACACGAGTTTCAGACCAAGAAAAAGCGTCAGCAGCAACGACAAAATGAAGAAAATGCCAAGCGTCTTAAAATGCAGCATCCACAGCAGCATACTCGTCTTCCCCCGATTCAGCAGGGTGGACAACATGCCCAAATGCGGCAAGGTCCTACCCACCCTGTTCATGGCTCTCAACCAGCAGTTGCTGCAGGACCTAGCCATCATTATGGGAAGCCTCGAGGTCCCTCTGGTGGTCCAGGAAGGTATCCTCCTGGTGGGAACCCTAGTGGAGGATACAATCATCCAAATCGTGGAGGTCAAGGAGGGGGTGCTGGTTACGGCAGTGGACCATATCCTCCTCAAGGGCGGGGGGCACCTTATGGGTCTAGTGGTATGCCTGCAGGAACCGGCGGTGGTCCTCGTGGTGGAGGTGGCTTTGGAGCTGGAGCTCCAAATTATCCTCAAGGTGGTCCTCCATATGGTGGATCAGCTGGTGGTCGTGGGAATCGCAACCAACAGTATGGTTGGCAGCAGTAG 1539 0.4834 MTMAAPGQLNVIESPSRGSRSVDCFEKLEQIGEGTYGQVYMAREIETGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDDQGRPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNEHNANLTNRVITLWYRPPELLLGTTRYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVAKTPWYNQFKPTRPMKRRLREVFRHFDRHALELLEKMLTLDPAQRIPAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEENAKRLKMQHPQQHTRLPPIQQGGQHAQMRQGPTHPVHGSQPAVAAGPSHHYGKPRGPSGGPGRYPPGGNPSGGYNHPNRGGQGGGAGYGSGPYPPQGRGAPYGSSGMPAGTGGGPRGGGGFGAGAPNYPQGGPPYGGSAGGRGNRNQQYGWQQ* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4197 512 Gene3D Phosphorylase Kinase; domain 1 13 121 - -
Mal2g4197 512 PANTHER CELL DIVISION PROTEIN KINASE 5 454 - -
Mal2g4197 512 Pfam Protein kinase domain 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g4197 512 PANTHER CYCLIN-DEPENDENT KINASE C-2 5 454 - -
Mal2g4197 512 CDD STKc_CDK9_like 25 324 - -
Mal2g4197 512 SUPERFAMILY Protein kinase-like (PK-like) 20 332 IPR011009 -
Mal2g4197 512 MobiDBLite consensus disorder prediction 337 366 - -
Mal2g4197 512 MobiDBLite consensus disorder prediction 335 512 - -
Mal2g4197 512 MobiDBLite consensus disorder prediction 372 387 - -
Mal2g4197 512 ProSiteProfiles Protein kinase domain profile. 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g4197 512 SMART serkin_6 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g4197 512 Gene3D Transferase(Phosphotransferase) domain 1 122 364 - -
Mal2g4197 512 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Mal2g4197 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4197 Mal-Chr2 77166100 77171774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4197 1 512 Core Cell Cycle Gene Families AT5G10270 77.395 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mal2g4197 Pkinase 4.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4197 K08819 - gmx:100793565 856.284