Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4190 ATGATGTCAAGGGGAGCAACATTTTGGTGTCATACATGCAGGCAGCCAATCTTGCTTGCAGGGAGGGATGCGCTTTGCCCTTACTGTGACGAAGGATTTGTTCAAGAAATTCACGAGAATCGAGGACTTGCATCGTCATCACAGTTGGAAGAGTTTCAAGATGATCCGGATATTTTCGATGCTATACATGCTGTTGTAAATCAAAGAGGTTCTGTACCAAGAATTGGGTTTAGAGATGCTATTGATAGTTACATGAGGCAGAGAATGGATGGAAGAAACGCAAACTTTGATGTCAGAAGGAGATCTGTTTCTGGTTCTGTTCCTGTTCCTGAACAAACTTGGGGTGTTTTTAGTTCTTCTGGTCGTTATTTAATATTTCAAGGTCAAACACCTAGCTCAAGAGGTGATCCTAGGCGCGCTGATTTTGGTGGCTACTTTATGGATCCCGGACTAGATGAACTTATCGAACAACTCAATACGAACGGTCGTGGTCCAGCCCCGGCCTCACGATCTTCAATTGAAGCAATGCCTACAATTAAGATAACACAAGCACATCTAAACTCTGATTCACACTGTCCAGTTTGTATAGAAAGGTTTGAACTCGGCTCTAAGGCAAGGGAAATGGCATGTAAGCATATTTACCACTCAGACTGCATTGTTCCTTGGTTAATTCAGCATAATTCATGTCCTGTTTGCCGTGTTGAGCTTCCACCTCATGGACGTGGTAGTTCTCGTGGTAGTCGAAATTGGGGAGGAAGGGATGACAATAGTACTGGTCAAAACGATAATGGCCGAGGAAGGAGAAATCCATTGTCGTTTTTGTGGCCATTTCGATCTTCCAGCTCAAATACTAATCATTGA 861 0.4332 MMSRGATFWCHTCRQPILLAGRDALCPYCDEGFVQEIHENRGLASSSQLEEFQDDPDIFDAIHAVVNQRGSVPRIGFRDAIDSYMRQRMDGRNANFDVRRRSVSGSVPVPEQTWGVFSSSGRYLIFQGQTPSSRGDPRRADFGGYFMDPGLDELIEQLNTNGRGPAPASRSSIEAMPTIKITQAHLNSDSHCPVCIERFELGSKAREMACKHIYHSDCIVPWLIQHNSCPVCRVELPPHGRGSSRGSRNWGGRDDNSTGQNDNGRGRRNPLSFLWPFRSSSSNTNH* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4190 286 MobiDBLite consensus disorder prediction 239 286 - -
Mal2g4190 286 Pfam zinc-ribbon 7 37 IPR039525 GO:0061630
Mal2g4190 286 ProSiteProfiles Zinc finger RING-type profile. 192 233 IPR001841 -
Mal2g4190 286 PANTHER OS03G0351800 PROTEIN 2 286 - -
Mal2g4190 286 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 2 286 - -
Mal2g4190 286 Pfam Ring finger domain 191 233 IPR001841 -
Mal2g4190 286 MobiDBLite consensus disorder prediction 249 267 - -
Mal2g4190 286 CDD RING-H2_RNF126_like 192 233 - -
Mal2g4190 286 SMART ring_2 192 232 IPR001841 -
Mal2g4190 286 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 156 239 IPR013083 -
Mal2g4190 286 SUPERFAMILY RING/U-box 172 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4190 Mal-Chr2 76866179 76867039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4190 137 249 C3H Transcription Factor Family AT5G01980 40.517 1.76e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4190 K11982 - cam:101496968 462.225