Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4186 ATGGATAAAGATCGTAAGCATGACTACGAGGAATCCTATGAAGGAAAACAAGGAATTTATGAAAAAAAGAAAGTAGCTTGTTATGTTTGCGAGAAGAAGTTTCCAACGAAGAATGCTTTGTATGGTCACATGAGATCTCATCCTGATAGGGTTTTTAAAGGAGTTAGTCCTCCTTCAAATCTTGATATTCAAAAGCCTTCTTCATCCAACAATTATAATTCTTCTACTCAACAGAATGAAGAAGATGATATTGGTAAGTTATATTTGCCAAACTGGAAAAAGAATGATAAAAGAGGTAGAAAATGTATTGGTAGTGCTGAAGCTGCAATAAATCTTTTGCATCTTAGGTCTGATAAGTACTCTTCTAATGAGCCGAAGAGTCCCAAATTTCCACTTACAATTAAGAAAAGACATACTTGTGTTGACGAGTCATCATCAAATGGGAATGGTAGGAAGGAATTTGCGGTGAAGAAGATTAAATTTGTTTTTGGTGGTTCATTGAAGATTGGAAACAAAAGTGTTGGTAATGGTGATAATGGTGATGATAGTCACAATAGTGATGAGAACCTAATGAGAAGCAAAGGTTTATCTGAATTTAAGGTTGAAGAGAAAGCAAGTAATCAGACCGCTGCTGAACAAAAAATATTGAATTTTGATTTGAATGAGGCATGTGTTATGGAGGAGTAA 687 0.3464 MDKDRKHDYEESYEGKQGIYEKKKVACYVCEKKFPTKNALYGHMRSHPDRVFKGVSPPSNLDIQKPSSSNNYNSSTQQNEEDDIGKLYLPNWKKNDKRGRKCIGSAEAAINLLHLRSDKYSSNEPKSPKFPLTIKKRHTCVDESSSNGNGRKEFAVKKIKFVFGGSLKIGNKSVGNGDNGDDSHNSDENLMRSKGLSEFKVEEKASNQTAAEQKILNFDLNEACVMEE* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4186 228 MobiDBLite consensus disorder prediction 48 85 - -
Mal2g4186 228 MobiDBLite consensus disorder prediction 181 207 - -
Mal2g4186 228 MobiDBLite consensus disorder prediction 172 210 - -
Mal2g4186 228 MobiDBLite consensus disorder prediction 60 82 - -
Mal2g4186 228 ProSiteProfiles Zinc finger C2H2 type domain profile. 25 47 IPR013087 -
Mal2g4186 228 ProSitePatterns Zinc finger C2H2 type domain signature. 27 47 IPR013087 -
Mal2g4186 228 SUPERFAMILY beta-beta-alpha zinc fingers 22 49 IPR036236 -
Mal2g4186 228 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 5 223 IPR044653 GO:0003700
Mal2g4186 228 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY 5 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4186 Mal-Chr2 76353262 76353948 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4186 24 58 C2H2 Transcription Factor Family AT2G26940 54.286 7.86e-09 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal2g4186 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4186 - - mtr:MTR_6g081160 204.912