Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4183 ATGGATAAAGATCGTAAGCATGACTACGAGGAATCCTATGAAGGAAAGCAAGGAATTTATGGCAAAAAGAAACTAGCTTGTCATGTTTGCGAGAAGAAGTTTCCAACGAAGAATGCTTTGTATGGTCACATGAGATCTCATCCTGATAGGGTTTTTAAAGGAGTTAGTCCTCCTTCAAATCTTGATATTCAAAAGCCTTCTTCATCCAACAATTATAATTCTTCTACTCAACAGAATGAAGAAGATGATATTGCTAAGTTATATTTGCCAAACTGGAAAAAGAAAGATAAAAGAGGTAGAAAATGTATTGGTAGTGCTGAAGTTGCAATAAATCTTTTGCATCTTAGGTCTGATAAGTACTCTTCTAATGAGCCGAAGAGTCCCGAATTTCCACTTACAATTAAGAAATGA 411 0.3504 MDKDRKHDYEESYEGKQGIYGKKKLACHVCEKKFPTKNALYGHMRSHPDRVFKGVSPPSNLDIQKPSSSNNYNSSTQQNEEDDIAKLYLPNWKKKDKRGRKCIGSAEVAINLLHLRSDKYSSNEPKSPEFPLTIKK* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4183 136 MobiDBLite consensus disorder prediction 117 136 - -
Mal2g4183 136 SUPERFAMILY beta-beta-alpha zinc fingers 21 49 IPR036236 -
Mal2g4183 136 Pfam C2H2-type zinc finger 27 49 - -
Mal2g4183 136 ProSiteProfiles Zinc finger C2H2 type domain profile. 25 47 IPR013087 -
Mal2g4183 136 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 7 107 IPR044653 GO:0003700
Mal2g4183 136 SMART c2h2final6 25 47 IPR013087 -
Mal2g4183 136 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY 7 107 - -
Mal2g4183 136 MobiDBLite consensus disorder prediction 60 82 - -
Mal2g4183 136 ProSitePatterns Zinc finger C2H2 type domain signature. 27 47 IPR013087 -
Mal2g4183 136 MobiDBLite consensus disorder prediction 48 84 - -
Mal2g4183 136 Gene3D Classic Zinc Finger 4 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4183 Mal-Chr2 76233148 76233558 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4183 24 58 C2H2 Transcription Factor Family AT2G26940 54.286 4.31e-09 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal2g4183 zf-C2H2_6 4.8e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4183 - - mtr:MTR_6g081160 144.821